| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4054 |
|---|
| Symbol | |
|---|
| ID | 5871854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4508142 |
|---|
| End bp | 4509506 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641549182 |
|---|
| Product | glutamine synthetase catalytic region |
|---|
| Protein accession | YP_001670280 |
|---|
| Protein GI | 167035049 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTTG CACCCGTAGA GCAGGCTACC CGTTTCCTGG CCGACAACCC CGATATCGAG
CTGTTCGAGC TGTTCATCCT CGACGCCAAC GGCGTACCAC GCGGCAAGCT GCTGCACCGC
GACGAACTGC TGGCCGTGTA CCAGACCGGC CGGCCACTGC CCAGCACCAT CCTCGGCCTG
ACCCTGAACG GCGACGACGT GGAAAACTCA GGCCTTGTGT GGGACGTCGG CGATATCGAC
TGCCGCGCCT ACCCGCTTGA CGGCAGCCTG GTGCGCCTGC CCTGGCGCCG GGTGCCTACC
GCCGCCGTGC AGGTGAGCAT GCACCCGAGC GAGGGCCTGC CGGCGAGCAT CGCCGACCCA
CGCCATGTGC TGCTGCGCAC CATCGAAGCA TTGAAGGCCG ACGGCTATCA CCCGGTGATG
GCCTGCGAAC TGGAGTTCTA CCTGCTCGAC CAGCAGCGTG ATGCCCAGGG CCGCCCGCAA
CCGGCGCTGG ACAACGATGG CGGTCGCCCT CGCAGCACTC AGGTCTATGG CTTGCGCGAA
CTGGAGCAGA TCGAGCCGTT TCTCGCCGAC CTGTACGCCG CCTGCAAGGC CCAGGGCATC
CCTGCGCGCA CGGCCATCTC CGAGTACGCC CCCGGCCAGG TGGAAATCAC CCTCGAGCAC
GGCGATGCAC TGCAGGCGAT GGACCAGGCG GTGCGCTACA AGCGCCTGGT GAAAGGTGTG
GCCCATGCCC ACGGCATGCA GGCTTGTTTC ATGGCCAAGC CATTCGCGCA ACTGGCCGGC
ACCGGCATGC ACATGCACCT GAGCCTGGCC GACAGCGCGG GCAACAACCT GTTCGCCAGC
GAAGACAAAG CCGGCACCCC GTTGCTGCGC CAGGCGGTGG CTGGCATGCT GCGCCACCTG
CGCGACTCGC TGCTGCTGTT CTGCCCCAAC GCCAACTCGT TCCGCCGCTT CCAGGCCAAC
AGCTATGCGC CCCTGGCGCC GACCTGGGGC GTGGACAACC GCACCGTGAG CCTGCGCGTG
CCAGGCGGCC CGGCCAACAG CCGACATGTG GAACACCGCA TCTGCGGCGC CGATGCCAAC
CCTTACCTGG CTGCAGCCGC GATCCTTGCA GCCAGCCACC GAGGCATCCG CGAACAGCTG
GACCCTGGCG CACCGGTCGA AGGCAACGGC TATGCCCAGG CCACCGAACA CCTGCCCACC
GACTGGCTGA CCGCCCTCGA CGCCCTGCAA AACTCCCATT GGGCCCGTGA AGCATTGGGC
GCAGACTTCC TTGGCGTGTA CCTGAAGGTC AAGCGCGCCG AGTACCGCCA GTTCATGGCC
GAAGTCAGCG AACAGGACTG GCGCTGGTAC CTGCACCAGG CCTGA
|
|---|
| Protein sequence | MHFAPVEQAT RFLADNPDIE LFELFILDAN GVPRGKLLHR DELLAVYQTG RPLPSTILGL
TLNGDDVENS GLVWDVGDID CRAYPLDGSL VRLPWRRVPT AAVQVSMHPS EGLPASIADP
RHVLLRTIEA LKADGYHPVM ACELEFYLLD QQRDAQGRPQ PALDNDGGRP RSTQVYGLRE
LEQIEPFLAD LYAACKAQGI PARTAISEYA PGQVEITLEH GDALQAMDQA VRYKRLVKGV
AHAHGMQACF MAKPFAQLAG TGMHMHLSLA DSAGNNLFAS EDKAGTPLLR QAVAGMLRHL
RDSLLLFCPN ANSFRRFQAN SYAPLAPTWG VDNRTVSLRV PGGPANSRHV EHRICGADAN
PYLAAAAILA ASHRGIREQL DPGAPVEGNG YAQATEHLPT DWLTALDALQ NSHWAREALG
ADFLGVYLKV KRAEYRQFMA EVSEQDWRWY LHQA
|
|---|
| |