Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4021 |
Symbol | |
ID | 5871821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4472176 |
End bp | 4472613 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549149 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001670247 |
Protein GI | 167035016 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.021519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGA CCGACAACCA ACACCGCTTC GGCATGCAGC TGGCCCAGAT GTCCCGGGGT TGGCGCGCCG AACTGGACCG CCGCCTGGCC GGGCTCAACC TGTCCCAGGC GCGCTGGCTG GTGTTGCTGC ACCTGGCCCG TTTCGAAGAA GCCCCGACCC AGCGTGAGTT GGCCCAGAGC GTGGGCGTTG AAGGCCCGAC CCTGGCGCGT CTGCTCGACA GCCTGGAGGC GCAAGGGTTG GTGCGCCGGC AAGCAGTGGT AGAAGACCGG CGGGCCAAGA AGATCTTGCT GTGCCCCCCG GCCAAGCCAC TGATCGACCA GATCGAGACC ATCGCCAATC AACTGCGGGT GGAACTGTTT ACCGGCGTGG ATGAGGCAGA ATTGCAAGTT TGCATGCGGG TGCATGCGAA GATTCTGGCC AACCTCGAGA AGTCCTGA
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Protein sequence | MPLTDNQHRF GMQLAQMSRG WRAELDRRLA GLNLSQARWL VLLHLARFEE APTQRELAQS VGVEGPTLAR LLDSLEAQGL VRRQAVVEDR RAKKILLCPP AKPLIDQIET IANQLRVELF TGVDEAELQV CMRVHAKILA NLEKS
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