| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4000 |
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| Symbol | |
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| ID | 5871800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4452002 |
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| End bp | 4452886 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549128 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001670226 |
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| Protein GI | 167034995 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000117315 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTACC GCCACCTGAC CCCATCCATG TCGTTGCTGC TGGCTTTCGA GGCCGCCGCC
CGGCATGAAA GCTACACCCG CGCCGCTGCC GAACTGTCAC TGACCCAGAG CGCGGTCAGC
CGCCAGGTGC AGGCGCTGGA GCAGCAGCTG GGCCTGACCT TGTTCCGCCG TGAGGGGCGC
CAAGTACAGC TGACCGATGT CGGCCGCCTG TACCAGCGTG AGCTCAGCGA GGCGCTGGGG
CGCATCCGCA GCGCCACCCT GCAGGCGCTG GCCTACCAGT CGGGGGTGGG CACCTTGCGC
CTGGCCACCC TGCCTACCTT CGGTTCGAAA TGGCTATTGC CGAGGCTGCA TGCGTTCTAC
AGTGCCCATC CGGGCATGCT GGTACACATT CATTCACGCA TCGAAGCCAT CAACTTCGAC
ACCAGCGAAA TCGACGCTGC CATCGGCGTG GCCAGCCACG ACCTGCCGGG GCTGATCTGC
CATCGCCTGC ATGCCGAGGA ACTGGTGGTG ATCCTGCCGC CCGAGGCTGG CGCGGCCAGC
CAGAACTGGA GCCCGACAAG GATCAGTGAA GAGGTGTTGT TGAATGTGGC CAACAACCCA
CACGCCTGGG GCGAGTGGTT TTCGCACCAT GGCCTGCCGC ACCGGTCGAT GCGCCTGGGC
CCGAGTTTCG AACTGACCTC GCACCTGATC CAGGCGGTGC GCGCCGGGAT TGGTATCGGC
CTGGTGCCGC GCATTCTGGT GGAGGAAGAG TTGGCCAAAG GTGAGCTGTA CAGCCCGGGG
GTGGCGTTTG CCAGCCAGCG CAGTTATTAC CTGATCTACC CGCCCAGGAA TGAGGCCTTG
CCTTCGCTAC GGGCATTCAG GAGCTGGTTG CTGGAGCAAA TCTGA
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| Protein sequence | MNYRHLTPSM SLLLAFEAAA RHESYTRAAA ELSLTQSAVS RQVQALEQQL GLTLFRREGR
QVQLTDVGRL YQRELSEALG RIRSATLQAL AYQSGVGTLR LATLPTFGSK WLLPRLHAFY
SAHPGMLVHI HSRIEAINFD TSEIDAAIGV ASHDLPGLIC HRLHAEELVV ILPPEAGAAS
QNWSPTRISE EVLLNVANNP HAWGEWFSHH GLPHRSMRLG PSFELTSHLI QAVRAGIGIG
LVPRILVEEE LAKGELYSPG VAFASQRSYY LIYPPRNEAL PSLRAFRSWL LEQI
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