| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3998 |
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| Symbol | |
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| ID | 5871798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4447604 |
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| End bp | 4448791 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549126 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_001670224 |
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| Protein GI | 167034993 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00916117 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGACT CACCGCGCCC CCTTGCGGTC ACCCTGCAAG TCGTTTCCAT CGTTCTCTTC
ACCTTCATCG GCTACCTGAA CATCGGCATT CCACTGGCCG TGCTACCTGG CTATGTGCAT
AACGACCTGG GCTTCAGCGC CGTGGTCGCT GGCCTGGTGA TCAGCGTGCA ATACCTGGCC
ACCCTGCTCA GCCGCCCTAC CGCCAGCCGC ATCATCGACA ACCACGGCAG CAAGAAAGCC
GTGATGTACG GCCTTGCCGG CTGCGGCCTC AGCGGGGTGT TCATGCTGGC GTGCGCCTTC
CTCACCCACC TGCCCTGGCT GAGCCTGGCT TGCCTGCTGG TCGGCCGCCT GGTACTGGGC
AGCGCTGAAA GCTTGGTGGG GTCGGGTGCG ATCGGCTGGG GTATCGGCCG GGTAGGCGCC
GCCAACACAG CCAAGGTCAT TTCCTGGAAC GGCATCGCCA GCTATGGCGC ACTGGCCATC
GGCGCTCCAC TGGGCGTGCT GATGGTCAAG GGGCTGGGGT TGTGGAGCAT GGGTGTGAGC
ATCATCCTGC TGTGCATCAT CGGCCTGCTG CTGGCCTGGC CCAAGCAGGC CGCCCCCATC
GTCAGCGGCG TACGCCTGCC ATTCCTGCGG GTGCTGGGCA AGGTGTTCCC GCATGGTTCG
GGCCTGGCCC TGGGCTCGAT CGGCTTCGGC ACCATCGCCA CCTTCATCAC CCTGTACTAC
GCCAGCCGAG GCTGGTCCGA TGCGGCGTTG ACCCTGAGCC TGTTCGGCGC CAGCTTCATC
AGCGCGCGGC TGCTGTTCGG CAACCTGATA AACCGTATCG GCGGCTTCAG GGTGGCAATC
GCCTGCCTGT CGGTGGAAAC ACTCGGGCTG CTGATGCTGT GGCTGGCCCC CAGTGCCGAA
ATGGCCTTGG CGGGTGCAGC ACTGAGCGGG TTTGGTTTCT CGCTGGTGTT CCCGGCGCTG
GGCGTGGAGG CAGTGAACCA GGTGTCGGCG GCCAACCGTG GGGCCGCGGT TGGGGCGTAT
TCACTGTTCA TCGATTTGTC GCTGGGGGTG ACCGGACCAC TGGTGGGCGC GGTGGCGGCG
GGGTTCGGGT TTGCTTCGAT GTTTCTGTTT GCGGCGACTG CCGCAGCTTG CGGGCTGGTG
TTGAGCTTGT ATCTGTACAG ACAAGCGCGG CGGCATCGAG ATCATTGA
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| Protein sequence | MPDSPRPLAV TLQVVSIVLF TFIGYLNIGI PLAVLPGYVH NDLGFSAVVA GLVISVQYLA
TLLSRPTASR IIDNHGSKKA VMYGLAGCGL SGVFMLACAF LTHLPWLSLA CLLVGRLVLG
SAESLVGSGA IGWGIGRVGA ANTAKVISWN GIASYGALAI GAPLGVLMVK GLGLWSMGVS
IILLCIIGLL LAWPKQAAPI VSGVRLPFLR VLGKVFPHGS GLALGSIGFG TIATFITLYY
ASRGWSDAAL TLSLFGASFI SARLLFGNLI NRIGGFRVAI ACLSVETLGL LMLWLAPSAE
MALAGAALSG FGFSLVFPAL GVEAVNQVSA ANRGAAVGAY SLFIDLSLGV TGPLVGAVAA
GFGFASMFLF AATAAACGLV LSLYLYRQAR RHRDH
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