| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3965 |
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| Symbol | |
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| ID | 5871759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4409523 |
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| End bp | 4410902 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549087 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001670191 |
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| Protein GI | 167034960 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGA CCCTTCAAAC GACCCTGTTG ATCATCGGCG GCGGCCCTGG CGGTTATGTA
GCGGCTATCC GCGCCGGACA ACTGGGCATT CCCACCGTGC TGGTGGAGGG CCAGGCACTG
GGCGGCACCT GCCTGAACAT TGGCTGCATC CCCTCCAAGG CGCTGATCCA CGTGGCCGAG
CAGTTCCACC AGGCATCGCG CTTCACCGAG CCATCGCCAC TGGGCATCAG CGTGGCTTCA
CCACGCCTGG ACATCGGCCA GAGCGTGGCC TGGAAGGACG GCATCGTCGA CCGCCTGACC
AGCGGTGTTG CCGCCCTGTT GAAAAAGCAC GGGGTGAAAG TGGTGCACGG CTGGGCCAAG
GTGCTCGACG GCAAGCAGGT CGAGGTCGAT GGCCAGCGCA TCCAGTGCGA ACACCTGTTG
CTGGCCACTG GCTCCAGCAG TGTCGAACTG CCGATGCTGC CGCTGGGTGG CCCGGTGATT
TCCTCGACCG AAGCCTTGGC ACCGAAAGCC CTGCCGCAAC ACCTGGTGGT GGTGGGCGGT
GGCTATATCG GCCTGGAGCT AGGCATCGCC TACCGCAAGC TGGGCGCGCA GGTAAGCGTG
GTGGAAGCGC GTGAGCGCAT CCTGCCAACC TACGACAGCG AACTCACCGC CCCGGTGGCC
GAGTCGCTGA AGAAGCTGGG CATCGCCCTG CACCTGGGCC ACAGCGTCGA AGGCTACGAA
AATGGTTGCC TGCTGGCCAA CGACGGCAAG GGCGGGCAAC TGCGCCTGGA AGCCGACCAG
GTGCTGGTGG CCGTGGGCCG TCGGCCCCGT ACCCAAGGTT TCAACCTGGA ATGCCTGGCG
CTGAAAATGA ACGGTGCCGC CATCGCCATC GACGAGCGCT GCCAAACCAG CATGCACAAC
GTCTGGGCGA TCGGCGACGT GGCTGGCGAG CCGATGCTTG CGCACCGGGC CATGGCCCAG
GGCGAAATGG TCGCCGAAAT CATCGCCGGC AAGGCCCGCC GCTTCGAACC GGCTGCGATT
GCCGCCGTGT GCTTCACCGA CCCGGAAGTG GTGGTGGTCG GTAAAACCCC GGAGCAGGCC
AGCCAGCAAG GCCTGGACTG CATCGTCGCG CAGTTCCCGT TCGCCGCCAA CGGCCGGGCC
ATGAGCCTGG AAGCGAAAAG CGGTTTCGTG CGCGTGGTGG CGCGGCGTGA CAACCACTTG
ATCCTGGGCT GGCAGGCGGT TGGCGTGGCG GTTTCCGAAT TGTCCACAGC GTTTGCCCAA
TCACTGGAAA TGGGCGCCTG CCTGGAAGAT GTAGCGGGCA CCATCCATGC CCACCCGACG
CTGGGTGAAG CGGTACAGGA AGCCGCCCTG CGCGCCCTGG GCCACGCACT GCATATCTGA
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| Protein sequence | MNPTLQTTLL IIGGGPGGYV AAIRAGQLGI PTVLVEGQAL GGTCLNIGCI PSKALIHVAE
QFHQASRFTE PSPLGISVAS PRLDIGQSVA WKDGIVDRLT SGVAALLKKH GVKVVHGWAK
VLDGKQVEVD GQRIQCEHLL LATGSSSVEL PMLPLGGPVI SSTEALAPKA LPQHLVVVGG
GYIGLELGIA YRKLGAQVSV VEARERILPT YDSELTAPVA ESLKKLGIAL HLGHSVEGYE
NGCLLANDGK GGQLRLEADQ VLVAVGRRPR TQGFNLECLA LKMNGAAIAI DERCQTSMHN
VWAIGDVAGE PMLAHRAMAQ GEMVAEIIAG KARRFEPAAI AAVCFTDPEV VVVGKTPEQA
SQQGLDCIVA QFPFAANGRA MSLEAKSGFV RVVARRDNHL ILGWQAVGVA VSELSTAFAQ
SLEMGACLED VAGTIHAHPT LGEAVQEAAL RALGHALHI
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