| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3906 |
|---|
| Symbol | |
|---|
| ID | 5871700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4350449 |
|---|
| End bp | 4351579 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641549028 |
|---|
| Product | chemotaxis-specific methylesterase |
|---|
| Protein accession | YP_001670132 |
|---|
| Protein GI | 167034901 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0528472 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTCA AGGTCCTGGT GGTGGATGAT TCCGGTTTCT TCCGCCGCCG CGTCTCGGAA
ATCCTCTCGG CGGATCCGAC GATCCAGGTA GTGGGTACCG CGACCAACGG CAAGGAAGCA
ATCGACCAGG CGCTGGCGCT CAAGCCCGAT GTCATCACCA TGGACTACGA AATGCCCATG
ATGGATGGCA TCACTGCTGT GCGGCACATC ATGCAGCGCT GCCCGACGCC CGTATTGATG
TTCTCGTCGT TGACCCATGA GGGCGCCCGC GTGACCCTTG ACGCGCTGGA CGCCGGCGCG
GTGGATTACC TGCCGAAAAA CTTCGAAGAC ATCTCGCGCA ACCCCGACAA GGTCAAGCAA
CTGCTGTGCG AAAAGGTGCA TACCATTTCC CGCAGCAACC GCCGTATTGG CAGCTATGCC
AGAACGGCCC CGGTCGCCGC GCCTGCGCCT GCCAGTAGCC ACGCGCCCGC CAGCACCTTC
ACCAGCCCGG CGCAGGCGCG CCCGGCTGTG CCTGCCCGTG CAGCGGCCCC GGCCCCGGCG
GCCACGCACT CGCCAGCGCC CAAGCGCAAG CCCTACAAAC TGGTGGCTAT CGGCACCTCC
ACGGGTGGCC CAGTGGCCCT GCAGCGGGTA TTGACCCAAT TGCCGGCCAA TTTCCCGGCG
CCGATCGTGC TGATCCAGCA CATGCCGGCG GCCTTCACCA AGGCCTTTGC CGAGCGCCTG
GACAAGCTGT GCCGCATCAG CGTCAAGGAG GCCGAGGACG GCGACATGCT GCGCCCTGGC
CTGGCCCTGC TGGCCCCTGG TGGCAAGCAG ATGATGATCG ATGGCCGTGG CACGGTGAAG
ATCCTGCCCG GTGACGAGCG CCTGAACTAC AAACCCTGCG TGGACATCAC GTTCGGTTCG
GCGGCCAAGT CGTATGGTGA CAAGGTGTTG TCGGTGGTGC TCACCGGCAT GGGCGCCGAT
GGCCGCGAAG GCGCGCGCCT GCTCAAGCAG GGGGGCAGCA CGGTGTGGGC CCAGGATGAA
GCCAGCTGCG TGATTTATGG CATGCCCATG GCCATCGTCA AGGCCAACCT GGCCGATGCG
GTGTACAGCC TGGACGAAAT CGGCAAGCAC CTGGTGGAGG CGTGCGTCTG A
|
|---|
| Protein sequence | MAVKVLVVDD SGFFRRRVSE ILSADPTIQV VGTATNGKEA IDQALALKPD VITMDYEMPM
MDGITAVRHI MQRCPTPVLM FSSLTHEGAR VTLDALDAGA VDYLPKNFED ISRNPDKVKQ
LLCEKVHTIS RSNRRIGSYA RTAPVAAPAP ASSHAPASTF TSPAQARPAV PARAAAPAPA
ATHSPAPKRK PYKLVAIGTS TGGPVALQRV LTQLPANFPA PIVLIQHMPA AFTKAFAERL
DKLCRISVKE AEDGDMLRPG LALLAPGGKQ MMIDGRGTVK ILPGDERLNY KPCVDITFGS
AAKSYGDKVL SVVLTGMGAD GREGARLLKQ GGSTVWAQDE ASCVIYGMPM AIVKANLADA
VYSLDEIGKH LVEACV
|
|---|
| |