Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3878 |
Symbol | |
ID | 5871672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4325935 |
End bp | 4326597 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641549000 |
Product | hypothetical protein |
Protein accession | YP_001670104 |
Protein GI | 167034873 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTGC CAACATTCTT CCACCGTCGC CGTCACTTGC TGCTAAGCCT GGTGCTCACA GCCGTCGCTG TACCGTTGGC GCTGGAGGCT GTCGAAAGCC GGGCGCAACC GGTGGATGGC ACTCAAACCT TGGTGTTCCT GCGTCATGGC GAGAAGCCAG GTGAAGGGTT GGGCCAATTG AACTGCCAAG GCCTCAACCG TGCGCTGGAC CTGGCAACCG TGCTGCCCGA ACGCTTCGGC AAGGCTGACT ACGTGTTTGC CGCCAACCCC TCACGGCATG TCGAAGAAGG CAGCAGGGAC GAAAGCTACA GCTATATCCG CCCGCTGATG ACCATCACCC CCAGCGCCAT TCGCCTCGGC TTGCCGGTGA ACATCGACTA CGGCGCCAAC GACACCGATG AACTGGCCGA AGAGTTGCTG AGCGAAAAAT ACCGCAATGC AACCGTCTAC ACCGCTTGGT CCCACGGCTA CCTGCCAGAG CTGATCAACA CCGTGGCGGG CAAGGCCCTG GGTGAAGAGC GGGTGATCAC CGAGGATTGG AGCGGGGATG ACTTCGACAC CCTCTATGTA CTGACCCTGA CCTGGCACGA CGGCAAGGCC AGCCTGCTCA GCCGTAACGT GCGCCAGGGC CTGAATGACG GTGCGCATAG CTGCCCGACC TGA
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Protein sequence | MKLPTFFHRR RHLLLSLVLT AVAVPLALEA VESRAQPVDG TQTLVFLRHG EKPGEGLGQL NCQGLNRALD LATVLPERFG KADYVFAANP SRHVEEGSRD ESYSYIRPLM TITPSAIRLG LPVNIDYGAN DTDELAEELL SEKYRNATVY TAWSHGYLPE LINTVAGKAL GEERVITEDW SGDDFDTLYV LTLTWHDGKA SLLSRNVRQG LNDGAHSCPT
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