Gene PputGB1_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3878 
Symbol 
ID5871672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4325935 
End bp4326597 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID641549000 
Producthypothetical protein 
Protein accessionYP_001670104 
Protein GI167034873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGC CAACATTCTT CCACCGTCGC CGTCACTTGC TGCTAAGCCT GGTGCTCACA 
GCCGTCGCTG TACCGTTGGC GCTGGAGGCT GTCGAAAGCC GGGCGCAACC GGTGGATGGC
ACTCAAACCT TGGTGTTCCT GCGTCATGGC GAGAAGCCAG GTGAAGGGTT GGGCCAATTG
AACTGCCAAG GCCTCAACCG TGCGCTGGAC CTGGCAACCG TGCTGCCCGA ACGCTTCGGC
AAGGCTGACT ACGTGTTTGC CGCCAACCCC TCACGGCATG TCGAAGAAGG CAGCAGGGAC
GAAAGCTACA GCTATATCCG CCCGCTGATG ACCATCACCC CCAGCGCCAT TCGCCTCGGC
TTGCCGGTGA ACATCGACTA CGGCGCCAAC GACACCGATG AACTGGCCGA AGAGTTGCTG
AGCGAAAAAT ACCGCAATGC AACCGTCTAC ACCGCTTGGT CCCACGGCTA CCTGCCAGAG
CTGATCAACA CCGTGGCGGG CAAGGCCCTG GGTGAAGAGC GGGTGATCAC CGAGGATTGG
AGCGGGGATG ACTTCGACAC CCTCTATGTA CTGACCCTGA CCTGGCACGA CGGCAAGGCC
AGCCTGCTCA GCCGTAACGT GCGCCAGGGC CTGAATGACG GTGCGCATAG CTGCCCGACC
TGA
 
Protein sequence
MKLPTFFHRR RHLLLSLVLT AVAVPLALEA VESRAQPVDG TQTLVFLRHG EKPGEGLGQL 
NCQGLNRALD LATVLPERFG KADYVFAANP SRHVEEGSRD ESYSYIRPLM TITPSAIRLG
LPVNIDYGAN DTDELAEELL SEKYRNATVY TAWSHGYLPE LINTVAGKAL GEERVITEDW
SGDDFDTLYV LTLTWHDGKA SLLSRNVRQG LNDGAHSCPT