Gene PputGB1_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3874 
Symbol 
ID5871668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4321426 
End bp4321863 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content62% 
IMG OID641548996 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001670100 
Protein GI167034869 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG CCATCGACCA ACTACTGATC AATGCACTGA TGGAGGACTC ACGCCGCTCG 
CTCAAAGCGC TGGCGCAGGT CAGCGGGCTG TCCGCGCCCA GCGTCAGCGA ACGCCTGCGC
CGCCTGGAGG AGCGTGGTGT GCTGCGCGGC TACACCGTGG AGGTCGACCC ACGCGCCTTT
GGTTACCAGT TGCAGGCCAT CGTGCGCATC CGCCCGCTGC CGGGGCAGTT GCACGAAGTG
GAGCGGCAGA TCATTGCCAT CCCTGAGTTC ACCGAGTGCG ACAAAGTCAC GGGTGAGGAC
TGTTTCATTG CCCGGCTGCA TGTGCGCTCG ATGGAACAAC TGGACACCCT GCTCGACCGT
ATCAATGTGC TGGCCGAAAC CAATACCGCC ATCATCAAGA AAAGCCCGGT GAAGCGGCGG
TTGCCGCCGA TGGATTGA
 
Protein sequence
MTDAIDQLLI NALMEDSRRS LKALAQVSGL SAPSVSERLR RLEERGVLRG YTVEVDPRAF 
GYQLQAIVRI RPLPGQLHEV ERQIIAIPEF TECDKVTGED CFIARLHVRS MEQLDTLLDR
INVLAETNTA IIKKSPVKRR LPPMD