Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3874 |
Symbol | |
ID | 5871668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4321426 |
End bp | 4321863 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641548996 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001670100 |
Protein GI | 167034869 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATG CCATCGACCA ACTACTGATC AATGCACTGA TGGAGGACTC ACGCCGCTCG CTCAAAGCGC TGGCGCAGGT CAGCGGGCTG TCCGCGCCCA GCGTCAGCGA ACGCCTGCGC CGCCTGGAGG AGCGTGGTGT GCTGCGCGGC TACACCGTGG AGGTCGACCC ACGCGCCTTT GGTTACCAGT TGCAGGCCAT CGTGCGCATC CGCCCGCTGC CGGGGCAGTT GCACGAAGTG GAGCGGCAGA TCATTGCCAT CCCTGAGTTC ACCGAGTGCG ACAAAGTCAC GGGTGAGGAC TGTTTCATTG CCCGGCTGCA TGTGCGCTCG ATGGAACAAC TGGACACCCT GCTCGACCGT ATCAATGTGC TGGCCGAAAC CAATACCGCC ATCATCAAGA AAAGCCCGGT GAAGCGGCGG TTGCCGCCGA TGGATTGA
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Protein sequence | MTDAIDQLLI NALMEDSRRS LKALAQVSGL SAPSVSERLR RLEERGVLRG YTVEVDPRAF GYQLQAIVRI RPLPGQLHEV ERQIIAIPEF TECDKVTGED CFIARLHVRS MEQLDTLLDR INVLAETNTA IIKKSPVKRR LPPMD
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