| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3862 |
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| Symbol | |
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| ID | 5871656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4306803 |
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| End bp | 4308578 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548984 |
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| Product | glyoxylate carboligase |
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| Protein accession | YP_001670088 |
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| Protein GI | 167034857 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3960] Glyoxylate carboligase |
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| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.985049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.531415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA TGAGAGCAAT CGATGCAGCC GTTCTGGTCA TGCGCCGTGA AGGTGTAGAT
ACCGCGTTCG GCATCCCAGG GGCTGCCATC AACCCGTTGT ATTCGGCCCT GAAGAAAGTC
GGTGGCATCG ATCACGTCCT CGCTCGCCAC GTCGAAGGTG CCTCGCACAT GGCCGAGGGC
TACACCCGTG CCAACCCAGG CAACATCGGT GTGTGCATCG GCACGTCCGG CCCTGCCGGC
ACCGACATGG TCACCGGCCT GTACAGCGCA TCGGCCGACT CCATCCCGAT TCTCTGCATC
ACCGGCCAAG CCCCGCGTGC ACGCCTGCAC AAGGAAGATT TCCAGGCCGT CGACATCACC
AGCATCGTCA AGCCAGTGAC CAAGTGGGCG ACCACCGTTC TGGAGCCAGG CCAAGTGCCT
TACGCCTTCC AGAAGGCCTT CTACGAAATG CGTACCGGCC GCCCAGGCCC GGTACTGATC
GACCTGCCGT TCGACGTGCA GATGGCCGAA ATCGAATTTG ACATCGACGC CTACGAGCCA
CTGGCCATCA ACAAGCCATC GGCGACCCGT GTCCAGGCCG AAAAAGCCCT GGCCCTGCTC
AATGACGCCG AGCGCCCGCT GCTGGTAGCC GGTGGCGGCA TCATCAACGC CGACGCCAGC
GACAAACTGG TCGAGTTCGC CGAACTGACC GGCGTCCCGG TAATCCCGAC CCTGATGGGC
TGGGGCACCA TCCCGGACGA CCACGCACAA ATGGTCGGTA TGGTCGGCCT GCAGACGTCG
CACCGCTACG GCAACGCCAC CCTGCTGAAA TCCGACCTGG TGTTCGGTAT CGGTAACCGC
TGGGCCAACC GCCACACCGG TTCGGTCGAT GTCTACACCG AAGGCCGCAA GTTCGTGCAC
GTCGACATCG AACCCACCCA GATCGGCCGC GTGTTCACCC CAGACCTGGG TATCGTTTCC
GATGCTGGCA AGGCACTGGA CGTGTTCCTG GAAGTGGCCC GCGAGTGGAA AGCCGCTGGC
AAGCTGAAGT GCCGCAAGGC CTGGCTCGAA GACTGCCAGG AGCGCAAGGC CACCCTGCAG
CGCAAGACCC ACTTCGACAA CGTGCCGGTC AAGCCACAGC GCGTGTACGA AGAAATGAAC
CAGGTATTCG GCAAGGACAC CACCTACGTC AGCACCATCG GCCTGTCGCA GATTGCCGGT
GCGCAGTTCC TGCACGTGTA CAAGCCACGC CACTGGATCA ACTGCGGCCA GGCCGGCCCG
CTGGGCTGGA CCATCCCTGC CGCGCTGGGT GTTGTCAAAG CCGACCCTAA ACGCAAGGTT
GTCGCGCTGT CGGGTGACTA CGACTTCCAG TTCATGATCG AAGAACTGGC AGTAGGCGCA
CAGTTCAACC TGCCGTACGT CCACGTGCTG GTGAACAACG CCTACCTGGG CCTGATCCGT
CAGGCGCAGC GTGGCTTCGA CATGGATTAC TGTGTACAAC TGGCGTTCGA GAACATCAAC
TCGACCGACG CCGCCACCTA CGGTGTAGAC CACGTTGCCG TAGTCGAAGG CCTGGGCTGC
AAGGCCATCC GTGTATTCGA GCCAGCAGAA ATCGCCCCTG CCCTGCTCAA GGCACAGAAA
ATGGCCGAAG AGTTCCGCGT ACCGGTGGTG GTCGAAGTGA TTCTCGAGCG TGTGACCAAC
ATTTCCATGG GCACCGAGAT CAACGCGGTC AACGAGTTCG AAGACCTGGC CCTGGTCGGC
AACGACGCGC CAACCGCCAT CTCGCTGCTG GACTGA
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| Protein sequence | MSKMRAIDAA VLVMRREGVD TAFGIPGAAI NPLYSALKKV GGIDHVLARH VEGASHMAEG
YTRANPGNIG VCIGTSGPAG TDMVTGLYSA SADSIPILCI TGQAPRARLH KEDFQAVDIT
SIVKPVTKWA TTVLEPGQVP YAFQKAFYEM RTGRPGPVLI DLPFDVQMAE IEFDIDAYEP
LAINKPSATR VQAEKALALL NDAERPLLVA GGGIINADAS DKLVEFAELT GVPVIPTLMG
WGTIPDDHAQ MVGMVGLQTS HRYGNATLLK SDLVFGIGNR WANRHTGSVD VYTEGRKFVH
VDIEPTQIGR VFTPDLGIVS DAGKALDVFL EVAREWKAAG KLKCRKAWLE DCQERKATLQ
RKTHFDNVPV KPQRVYEEMN QVFGKDTTYV STIGLSQIAG AQFLHVYKPR HWINCGQAGP
LGWTIPAALG VVKADPKRKV VALSGDYDFQ FMIEELAVGA QFNLPYVHVL VNNAYLGLIR
QAQRGFDMDY CVQLAFENIN STDAATYGVD HVAVVEGLGC KAIRVFEPAE IAPALLKAQK
MAEEFRVPVV VEVILERVTN ISMGTEINAV NEFEDLALVG NDAPTAISLL D
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