| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3835 |
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| Symbol | |
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| ID | 5871628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4274128 |
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| End bp | 4274892 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548957 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001670061 |
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| Protein GI | 167034830 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.308177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.460192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAATAT TGCTGGCCCT TCTGCTGCTC TGGTCTGCCC ACTGCCTGGC TGAACAGCCG
GTGCTGCGCT TCTCTGTCGC GGAGAGCTGG AGCATGCCGC TGGTGCGCAT CGAAGCTGAC
CAGCCCGTGG AAGGCCTGGT GTACGACCTG ATAGAGGCGC TGGCCAAGGA AGTGGGCGTA
CGCCCCCAAT ACCACGTGAT GGCTCGCCTG CGCCTGCAGG AGGCCATGAA CAGCGGTGAT
ATCGATGTGC GCTGCTATGT CAGCACCCAG TGGTTCAATG ATCGCCCAGG GGATTTTGTC
TGGAGCATCC CGCTGATTCA CCAGCGCGAC CTGCTGGTGG GGCGCGTTGG CGATAGCTCC
CCGATGCCCG CGGAGCAATT GCCTGCCCAG GCTATCGGCA CGGTGCTGGG TTACACCTAC
TCGACCTTGC AACCTCTGCT GGATCAAGGC CGACTGCACC GCGAAGACAG CCGCAGCCAG
TTGCTGGTGC TGCAGAAGCT GCAGGCTGGG CGCTATCGGC ATGCGGTGAG CAACCAACTG
TCGTTGCAGT GGTTCAACCA GGGTTTGCCA GCCGACCAAC GATTGCAGGG ATTGGCGGTG
CTGGAAGAGC AGGACCTCGG GTGCATGGTG CGCAATGATC CCGCAGTGCC GACACAAGGG
TTGTTGCGGG CGTTGGTAAG GATGAAGCAG TCGGGGGAGA TCGAGCGGAT TTTGCAGCGC
TATGGCGGGA TGGGGCCTTG GGATGCTCCG GCGCCCCACC CTTGA
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| Protein sequence | MPILLALLLL WSAHCLAEQP VLRFSVAESW SMPLVRIEAD QPVEGLVYDL IEALAKEVGV
RPQYHVMARL RLQEAMNSGD IDVRCYVSTQ WFNDRPGDFV WSIPLIHQRD LLVGRVGDSS
PMPAEQLPAQ AIGTVLGYTY STLQPLLDQG RLHREDSRSQ LLVLQKLQAG RYRHAVSNQL
SLQWFNQGLP ADQRLQGLAV LEEQDLGCMV RNDPAVPTQG LLRALVRMKQ SGEIERILQR
YGGMGPWDAP APHP
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