| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3793 |
|---|
| Symbol | |
|---|
| ID | 5871586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4221376 |
|---|
| End bp | 4222722 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641548915 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001670019 |
|---|
| Protein GI | 167034788 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0444621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.546364 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCTGG ATTACCTCGT GCCTTCCTGG CATGAGATCG AGTCACGCAT CACCCATCAA
ATGGGCTATC AGGGAGGCGC CCATTTTCGT ACTTACCTCA ATCAGGAAGT GCCCTCGCTA
GCACTCAACC TGCGCCGTGT GGACAGCGTC CGGCGGGCCT TTTACCAGGC CGAAACGATG
GCAGGTAATT TGCTGTACCA GCGCTTCGCC GACCTTGATG TAAAAAACAT CCTCGCCGAC
CTGCTCGGCA TCGCCACGCA AATGGCGATG ATCGTCGCCG GCAGCGCCGT CACCGGGGGC
ATGCTCGGTG CCGGTATCGG CGCCTTTGCC GGAGGAGCCG GAGCCATTCC CGGAGGTGTG
GCCGGCACTG CCATTGGCTT CAAGGTAAGC GGTTGGATCC TCGGCGCGCT GGGCATCGCC
TCACTCGCCG AGTTCTTCGT CGAAGGCCTG CCACGCATCG GCGATTACTA CCTGCGCGGT
ATCGGCATCG CCTGGGATGG CACGCGCGGC GAAGAAGGCT TGAATGCTTT CAGTCAAGAC
AGCCCATTTG CCATCAGCCA GGCGGCGCAT TACATAGCCA TCGGCCATGT GGAAATCGTG
ATGCTGCTGT TGGGGGCAAT GGTTTCCTAT CTAACCCGCG GACGCGGTGA CGCAGGTACG
CTTGCCCAGC AAATGGCCGC CAGCCCGAAA GGCGCGCGGA TCGGGCAATG GATGCTCAAG
CATGAAGAGG CATTGAAGCA ACGGCTGGAC CTGCAAGTGC CGGAGCGGCG CAAAGGAGCA
GCGAAAGAGC CGCAACCCAT GCAGCCGAAT CGGCCGGAGG GAAAAGACAA AGAGCCCCCG
ACGGGGAAGC CCGGTAGCAT GCCGCTGCAT ACGGTGGCAT GTTTCAAGGC AGACAAATTG
CCGGCCTCCA AGCATGCCGA GTTTGAACGG CAGTTGAAGG GACAGCAGGA TGGGTTGAAT
CGGCTGACGG TCGAGGAGTT TTTGGAGAAC GTTGCCAATC CGGTAAAACG AGACCCACGT
GTCGCTAAAG TCGCTAGGCT CAAGCTTCAA CGTGAGCTAC AAGAACGATT ACAGCGAGAG
CTATCTCAAC ATATGTCTCC ACTGGAAGCA GAAAAACTTG CCTTCAACCA AGCAAAAGAA
ACGATGGCAT CTATAGCTGC ACTACATAAT CCAGACCTCG TTGCCGGAGG AAAAGACATC
ATTTCAGGCT TCGGAGACAA GCAAGTAAAC TCAACCATTG GCCCTCAATG GAAAGGCAAG
GTTACCGCAC TGACATCCGC AGCAAAGCAA GTTCCACTCA CAGAAATAAA TTCAACCAAA
ATGAATGTAA AGCTTCATAA ATGCTAA
|
|---|
| Protein sequence | MYLDYLVPSW HEIESRITHQ MGYQGGAHFR TYLNQEVPSL ALNLRRVDSV RRAFYQAETM
AGNLLYQRFA DLDVKNILAD LLGIATQMAM IVAGSAVTGG MLGAGIGAFA GGAGAIPGGV
AGTAIGFKVS GWILGALGIA SLAEFFVEGL PRIGDYYLRG IGIAWDGTRG EEGLNAFSQD
SPFAISQAAH YIAIGHVEIV MLLLGAMVSY LTRGRGDAGT LAQQMAASPK GARIGQWMLK
HEEALKQRLD LQVPERRKGA AKEPQPMQPN RPEGKDKEPP TGKPGSMPLH TVACFKADKL
PASKHAEFER QLKGQQDGLN RLTVEEFLEN VANPVKRDPR VAKVARLKLQ RELQERLQRE
LSQHMSPLEA EKLAFNQAKE TMASIAALHN PDLVAGGKDI ISGFGDKQVN STIGPQWKGK
VTALTSAAKQ VPLTEINSTK MNVKLHKC
|
|---|
| |