Gene PputGB1_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3787 
Symbol 
ID5871580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4214218 
End bp4215186 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID641548909 
Productalpha/beta hydrolase domain-containing protein 
Protein accessionYP_001670013 
Protein GI167034782 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGC ACCCTGATCT GGCGGCATTT CTGGAATTGG TCGAGTTTGG CCGGCTGACG 
GGCAGGAGCC TGCCCATGCA CGCGATGGAC GTGGCCCAGG CCCGCGCCGA GTTCGCCGGC
AGCTCGCAGG TGCTCGACCC GAGCCCGCCG GGCAATGTCA CGGTCAGCGA ACTGCAGGTT
ACCGCGCGCG ATGGCACCCG CCTGGGTGCG CGCTTGTATC GCCAAGGCGA GGCCAGCGCT
GCCTTGCAGC CGGTGATTTT CTACCTGCAC GGGGGCGGCT ATGTGGTTGG CAGCCTCGAC
TCGCACGATT CGGTTTGCCG CCGCCTGGCG GCCTTGGGCG AATTTGCGGT GCTGGCGGCG
GATTACCGGC TGGCACCGGA ACAGCAGTTT CCGGTGGCCT TGCACGACGT GCTAGATGTC
GCCAACTGGC TGGCCGAACA GGCAGCGACG CTGGGCCTGG ATAACCGCCG GGTGGTGTTG
GCGGGGGACA GCGTGGGCGC CAGCCTGGCG GCAGTGCTGG CCATCACGGC GGTCGAGCAA
CCCGAAGCAC TGGCGTTCAA GCCGCTAGGG CAGCTGCTGT TCTACCCGGT GACCGATATT
TCCTGCCAAC GGGCTTCGCA CCGCGAGCAT GCCGAGGGCT ATCTGCTGGA GACGCCCACG
CTGGAGTGGT TCTACCAGCA CTATGCGCCG CAGCCTGAGC AGCGGCTGGA CTGGCGGGTA
TCGCCGTTGC TGTCGACGCT GCGTACACCG CTGGCACCGG CTTACCTGTT CGTGGCCGAG
TACGACCCGT TGCATGATGA AGGCATCGCG TATCGTGACT GGTTGCTGGC AGGGGGCACG
GCGGTGACCT TTGCGCGGGT TGAGGGGTTG ACCCATGACT TTTTGCGCAT GTCGGGGATT
GTGGGGCAGG TGGATGGGAT TTACCGGGAT GTCGGCGAGT GGTTGCAGCA GGTTGGCGGC
CAGTTCTGA
 
Protein sequence
MALHPDLAAF LELVEFGRLT GRSLPMHAMD VAQARAEFAG SSQVLDPSPP GNVTVSELQV 
TARDGTRLGA RLYRQGEASA ALQPVIFYLH GGGYVVGSLD SHDSVCRRLA ALGEFAVLAA
DYRLAPEQQF PVALHDVLDV ANWLAEQAAT LGLDNRRVVL AGDSVGASLA AVLAITAVEQ
PEALAFKPLG QLLFYPVTDI SCQRASHREH AEGYLLETPT LEWFYQHYAP QPEQRLDWRV
SPLLSTLRTP LAPAYLFVAE YDPLHDEGIA YRDWLLAGGT AVTFARVEGL THDFLRMSGI
VGQVDGIYRD VGEWLQQVGG QF