| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3783 |
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| Symbol | |
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| ID | 5871576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4208213 |
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| End bp | 4209628 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548905 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001670009 |
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| Protein GI | 167034778 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGC CTAGCCGCAT CAGCCTGTTG ACGTTGTGCC TGCCCTTGTG TGCAACCCTC
GCCGCCTGCA GCACGCCACC CACCCCCTCC AGCGGCATCG TCGCACCACT CGCCTGGCAA
GGTGACGCCC CAGCGCCGTC GGCACATCTA CCGACGGTAC AGTGGTGGCA CGCCTTTGCC
AGCCGTGAAC TGGACCGCCT GGTACAGCAT GCCCTGGACA ACGCCCACGA CCTGGCCGGC
GCCACCGCAC GGGTGCGCCA GGCCCAGGCC CGCGCGGTCA TGGCCGGCGC CCCCTTGCTG
CCAGAAGTGC AGTTGGGCCT GAACGGCAGC CGCCAGCGCC TGTTGCATGG CGACGGCAAT
GACCAGCTTG ATGTCAGCCG CAGCGAGCGC ACCAGCACTT CGTTCGACGC CCAGCTCAGC
GCCAGCTACG AAATCGACTT CTGGGGCGGC CTACGCGCAA CCCGCGACAA TGCCCTGCGT
AGCCTCGACG CCAGCCGCTT CGACCGCCAG ACCGTGGAGC TGACGCTGGT CAGCGCGGTC
GCCGACAGCT ACCTGCAGGG CCTGGCCCTG CAGGAGCAGT TGCGTATCGC CCGCCTCAAC
CTGCGCAACG CCCAGGACGT GCTGGGCCTG GTCGAGGCAC GCCAGCGCAG CGGCTCCGCC
ACGCGCCTGG AACTGGCCCA GCAGCGCAGC CTGGTGGCCA CCCAGCAACG CCAGCTGCCG
TTGCTGGAAC AGCAGTGGCA AGACAGCCGC GTCACCCTGG CAACCCTGCT TGGCGACCCG
GTGCAGTCAC TGCCCAACAG CCAGGAAGCG ATCGATGCCC TGCAATGGCC AGCCATTGGT
AGTGGTGTAC CCAGCGAACT GCTCACCCGA CGCCCAGACA TTGCCGCCGC AGAAGCGCGG
TTGGCGGCCG CCAGTGCCAA TGTGCAGGTC GCCCGCGCCG CCATGCTGCC CAAGCTGACC
TTGGGGGCCA ACCTGGGTGC TGGCTCCAAT ACCTTTGCCC ACTTGTTGGA CAGCTCCTAC
TACACCCTCA CCAGTGGCCT GGTCGCGCCA ATCTTCAACA ACGGCCGGCT ACGCGCAGCG
CGTGAACTGG CCGAGGCTGA ACAGGCTGAG TTGCTGGAGA CCTATCGCAG CAGCATCCTG
GCGGGTTTTG CCGATGTCGA AAAAGCGCTC AATGCAATCC AGGGCGTGGA CCGTCAGCGG
CAATGGCAGG ACGAGGAAGT GCAGCAGGCG CGGTTGGCGT TCGACCTGGC ACAGCAGCGC
TATGGCGCGG GTGCCGAAAC CTTGTTGAGC GTACTGGAGA CCCAACGCAC GTTGTATGTG
GCCCAGGACC AGCAGGCGCG ACTGCGTTTG GCCCGGCTGC TGGGCAGTGT GGCGTTGTAC
AAAGCGTTAG GGGGAGGCTG GCAACTCGAA CGTTAG
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| Protein sequence | MTLPSRISLL TLCLPLCATL AACSTPPTPS SGIVAPLAWQ GDAPAPSAHL PTVQWWHAFA
SRELDRLVQH ALDNAHDLAG ATARVRQAQA RAVMAGAPLL PEVQLGLNGS RQRLLHGDGN
DQLDVSRSER TSTSFDAQLS ASYEIDFWGG LRATRDNALR SLDASRFDRQ TVELTLVSAV
ADSYLQGLAL QEQLRIARLN LRNAQDVLGL VEARQRSGSA TRLELAQQRS LVATQQRQLP
LLEQQWQDSR VTLATLLGDP VQSLPNSQEA IDALQWPAIG SGVPSELLTR RPDIAAAEAR
LAAASANVQV ARAAMLPKLT LGANLGAGSN TFAHLLDSSY YTLTSGLVAP IFNNGRLRAA
RELAEAEQAE LLETYRSSIL AGFADVEKAL NAIQGVDRQR QWQDEEVQQA RLAFDLAQQR
YGAGAETLLS VLETQRTLYV AQDQQARLRL ARLLGSVALY KALGGGWQLE R
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