| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3747 |
|---|
| Symbol | |
|---|
| ID | 5871540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4170332 |
|---|
| End bp | 4171336 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641548869 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_001669973 |
|---|
| Protein GI | 167034742 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCCA GAGCGCTGGC CTGCGTAATG TTGTCTGCCT CGCTTTGCCA GGCGGCACAC
GCGCGCGACT ACCGCTACAG CGACGCCCAC CTGCACTACG TCGACTTCTT TCAGGAAAGC
GAAGGCATGC CGGCGTTGCT CAAGGCCATG GACGCCGCAG GCATCGAGCA GTCGATGATT
GCCGGCATTC CAGTGGCCAA GAAATGGCAC GAAGACGAAC CCAAGCGCCC ACGCTATTAC
GCCGGTGACG ACGCCGATGC CTATTGGTAC AGCGCCACCG ACACCTATGT GGCAGCGGCG
CTGGAGCAGT TGCCGATTGA GCAACGAAAA CGCTTTCATC CGTTTTTGAC CGGCTTCAAC
CCGGTGGACA AGAACGCTGT CAGCCACATC GAGCGTATGC TCGAAATGAA CCCGGGGTTA
TGGCAGGGCA TTGGCGAGGT GTTCACCCGC CACGATGACC TGACCGCGCT GACCAGTGGC
GACACACCGC GTGCCAACAA CGAGGCCATG ACGCGTATCT ACCATCTGGC GGCCGAGCGT
GACCTGCCGG TGCTCCTGCA TTCCAACATC ACCTCCAAGC GCGAGCGCAA CCCGCTGTAC
CTGGCGGAGA TTGAAGAGCC ACTGCGCAAT CACCCGCATA CACGGTTCAT CTGGGCGCAT
GCGGGCAGCA GCATGGAGAT ACACCGGCAC CAGACGCAGA TGGGTTTTCT GTTGCCGGTG
CTCACGCGAT TGCTGGAGGA CTACCCGAAC TTGTATGTCG ACCTGTCGTG GAGTGTGCTG
CAGCCTTATC TGCTGGATGA CAAAGGCGTG CCGCGCAAGG AATGGCTGGC GCTGGTCGAG
CGCTATCCAG AGCGGTTCAT GCTGGGGTCG GATGTGGTGG GGCGGTTTGG CAGCCTGGGT
GAGCAGATGC ACGGGTTCAA GCCGTTTCTG GATGCCTTGC CGATAGAGGT GGCCAACAAA
GTGGCCCGCG ATAACTTTCT GGCTGTACTG CCCAGGCAGA AATAA
|
|---|
| Protein sequence | MIARALACVM LSASLCQAAH ARDYRYSDAH LHYVDFFQES EGMPALLKAM DAAGIEQSMI
AGIPVAKKWH EDEPKRPRYY AGDDADAYWY SATDTYVAAA LEQLPIEQRK RFHPFLTGFN
PVDKNAVSHI ERMLEMNPGL WQGIGEVFTR HDDLTALTSG DTPRANNEAM TRIYHLAAER
DLPVLLHSNI TSKRERNPLY LAEIEEPLRN HPHTRFIWAH AGSSMEIHRH QTQMGFLLPV
LTRLLEDYPN LYVDLSWSVL QPYLLDDKGV PRKEWLALVE RYPERFMLGS DVVGRFGSLG
EQMHGFKPFL DALPIEVANK VARDNFLAVL PRQK
|
|---|
| |