Gene PputGB1_3743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3743 
Symbol 
ID5871536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4165491 
End bp4166381 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content67% 
IMG OID641548865 
Producthypothetical protein 
Protein accessionYP_001669969 
Protein GI167034738 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGT TGCTGCGCCT GTTGCTGCTG TGCCTGTGGC CGCTGGGGCC ACTGTCGGCC 
AGTGAAATCC TGCTGGTGGG GGCTGAGGAC CAGCCCGGTA TCCGCAGTTT CGTCGCCGCG
CTGGAAAGCC GTCGGCCCCA CGATCATGTG CATTTCCAGA CCACAGCCGA CCTGCCGCGC
CCGAGCAAGC TCAAAGCCGA CCAGCGTTTG ATCCTGCTCG ACAGCTCCGC ACTGGAGTGG
CGGCTGGGCG AAACCGCCGG CCCACCGGCC CTGGCCATGC GGGTCAGCCG GGTACAGGCT
GAACAGCGCC TGGGAAAGTC GCGCCCCGCG TTTCTCACCT TGCTGTGGAG TGACGCGCCG
TTGGGCCGGC AATTGCGCCT GACGCGCTAC CTGCTGCCGC AGGCCCAGCG CATTGGGGTG
TTGTACGGTG AGCACAGCAG TTTTCTGCTC GACGAGTTGC GCCATGCCGC ACGCCCCCTG
GGCCTGGAGA TCATCGCCCA GGACTGGTCC GACCCGCGTG ACAGCCGGCC GCTGCAGCAT
CTGCTGGGTA GCAGCGATGT GCTGCTGGGC CTGGACGACC CCAACCTGTA CAACTCCAAG
ACCGCGAAGA ACCTGCTGCT GAGCAGCTAC GGTCGACAGA TGGCCCTGAT CGGGCCGAAC
GCCGGTTTTG TTCGCGCCGG CGCCCTGGCC AGCACCTACA GCGATCAGGA CGACTGGCTG
GCGGAGCTCG ACCAGTTGCT CGATCAGCCG CCTGCGCGCT GGCCGCGCAG CCTGTACCCG
ACACGCTATG GCGTCAGTGG CAACCAGCAG GTGGCCCGCG CCCTGGGCCT TGAACCGATC
GATCCGAACG CCGCCGCCAA GGCCCTGGCC GCAGGAGACC CCACCCCATG A
 
Protein sequence
MALLLRLLLL CLWPLGPLSA SEILLVGAED QPGIRSFVAA LESRRPHDHV HFQTTADLPR 
PSKLKADQRL ILLDSSALEW RLGETAGPPA LAMRVSRVQA EQRLGKSRPA FLTLLWSDAP
LGRQLRLTRY LLPQAQRIGV LYGEHSSFLL DELRHAARPL GLEIIAQDWS DPRDSRPLQH
LLGSSDVLLG LDDPNLYNSK TAKNLLLSSY GRQMALIGPN AGFVRAGALA STYSDQDDWL
AELDQLLDQP PARWPRSLYP TRYGVSGNQQ VARALGLEPI DPNAAAKALA AGDPTP