Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3743 |
Symbol | |
ID | 5871536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4165491 |
End bp | 4166381 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641548865 |
Product | hypothetical protein |
Protein accession | YP_001669969 |
Protein GI | 167034738 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTGT TGCTGCGCCT GTTGCTGCTG TGCCTGTGGC CGCTGGGGCC ACTGTCGGCC AGTGAAATCC TGCTGGTGGG GGCTGAGGAC CAGCCCGGTA TCCGCAGTTT CGTCGCCGCG CTGGAAAGCC GTCGGCCCCA CGATCATGTG CATTTCCAGA CCACAGCCGA CCTGCCGCGC CCGAGCAAGC TCAAAGCCGA CCAGCGTTTG ATCCTGCTCG ACAGCTCCGC ACTGGAGTGG CGGCTGGGCG AAACCGCCGG CCCACCGGCC CTGGCCATGC GGGTCAGCCG GGTACAGGCT GAACAGCGCC TGGGAAAGTC GCGCCCCGCG TTTCTCACCT TGCTGTGGAG TGACGCGCCG TTGGGCCGGC AATTGCGCCT GACGCGCTAC CTGCTGCCGC AGGCCCAGCG CATTGGGGTG TTGTACGGTG AGCACAGCAG TTTTCTGCTC GACGAGTTGC GCCATGCCGC ACGCCCCCTG GGCCTGGAGA TCATCGCCCA GGACTGGTCC GACCCGCGTG ACAGCCGGCC GCTGCAGCAT CTGCTGGGTA GCAGCGATGT GCTGCTGGGC CTGGACGACC CCAACCTGTA CAACTCCAAG ACCGCGAAGA ACCTGCTGCT GAGCAGCTAC GGTCGACAGA TGGCCCTGAT CGGGCCGAAC GCCGGTTTTG TTCGCGCCGG CGCCCTGGCC AGCACCTACA GCGATCAGGA CGACTGGCTG GCGGAGCTCG ACCAGTTGCT CGATCAGCCG CCTGCGCGCT GGCCGCGCAG CCTGTACCCG ACACGCTATG GCGTCAGTGG CAACCAGCAG GTGGCCCGCG CCCTGGGCCT TGAACCGATC GATCCGAACG CCGCCGCCAA GGCCCTGGCC GCAGGAGACC CCACCCCATG A
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Protein sequence | MALLLRLLLL CLWPLGPLSA SEILLVGAED QPGIRSFVAA LESRRPHDHV HFQTTADLPR PSKLKADQRL ILLDSSALEW RLGETAGPPA LAMRVSRVQA EQRLGKSRPA FLTLLWSDAP LGRQLRLTRY LLPQAQRIGV LYGEHSSFLL DELRHAARPL GLEIIAQDWS DPRDSRPLQH LLGSSDVLLG LDDPNLYNSK TAKNLLLSSY GRQMALIGPN AGFVRAGALA STYSDQDDWL AELDQLLDQP PARWPRSLYP TRYGVSGNQQ VARALGLEPI DPNAAAKALA AGDPTP
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