Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3724 |
Symbol | |
ID | 5871517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4141252 |
End bp | 4141818 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641548846 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001669950 |
Protein GI | 167034719 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0463158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAAACC ACAATCTTGA TGGAAAACTC GACTTCCTGC GCCAAGCCGA AAAGCTCAAG AGCGTGACAC GCAGCGCCCA CACCTCGACA GGCCGGCGTG AAAGCACCGC CGAGCACAGT TGGCGGCTGG CGTTGCTGGC GCTGGTGTTC GAACAAGAAC TGGGTGATGT CGATATCTGC AAGGTGCTCA AGCTATGCCT GGTCCATGAC CTTGGGGAAG CGCTGAGTGG TGATGTACCT GCGCCGCAAG CGCATGCGGT TCCAGACAAA GGGACGAATG AGCGGCAGGA CCTGGTTGCC ATGACCTCAA TGCTGGAACC CTCGATGCAG GACAGCATCG TTGGCTTGTT CGATGAGTAC GAAGCGGCCA GTACGCCAGA GGCCAAAGTG GTCAAGGCCT TGGACAAAAT CGAGACCCTG CTGCAACACA CCCAAGGCGA TAACCCGCCC GGTTTCGACT ATGCGTTCAA TCTTGAGTAT GGCCGACGCT ATACCGATGC CATACCGTTC CTGGCCTCGC TGAGGCGAGT AATCGATGAG GAAACACGCA AACGCCTGAA TAGCTGA
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Protein sequence | MPNHNLDGKL DFLRQAEKLK SVTRSAHTST GRRESTAEHS WRLALLALVF EQELGDVDIC KVLKLCLVHD LGEALSGDVP APQAHAVPDK GTNERQDLVA MTSMLEPSMQ DSIVGLFDEY EAASTPEAKV VKALDKIETL LQHTQGDNPP GFDYAFNLEY GRRYTDAIPF LASLRRVIDE ETRKRLNS
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