| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3701 |
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| Symbol | |
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| ID | 5871494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4116129 |
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| End bp | 4117982 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548824 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_001669928 |
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| Protein GI | 167034697 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTC TCTTCCTGAC TTTCGTCTTC CCCCTCGTCG GCTTCCTGCT GCTGTCGTTC
TCGCGCGGGC GGTTCTCGGA GAACCTGTCC GCCCTGATCG GCGTCGGCTC GGTAGGCCTG
TCGGCCGCGA CCGCCGCCTA CGTCATCTGG CAATTCAACG TTGCCCCGCC TGAAGGCGGC
GCCTACAGCC AGTTGCTGTG GCAATGGATG TCGGTGGACG GCTTCGCGCC GAACTTCACC
CTGTACCTGG ACGGCCTGTC GGTCACCATG CTCGGCGTGG TGACCGGTGT CGGCTTCCTG
ATCCACCTGT TCGCGTCCTG GTACATGCGC GGCGAAGCGG GCTACTCGCG CTTCTTCTCG
TACACCAACC TGTTTATCGC CAGCATGCTG TTCCTGATCC TTGGCGACAA CCTGCTGTTC
ATCTACTTCG GCTGGGAAGG CGTGGGCCTG TGCTCGTACC TGTTGATCGG TTTCTACTAC
AGCAACCGCA ACAACGGTAA CGCGGCACTC AAGGCATTCA TCGTCACCCG CATCGGCGAC
GTGTTCATGG CCATCGGCCT GTTCATCCTG TTCGCCCAGC TGGGTACCCT GAACGTGCAG
GAACTGCTGG TGCTGGCACC ACAGAAGTTC CAGGCTGGCG ACACCTGGAT GGTGCTGGCA
ACGCTGATGC TGCTGGGTGG TGCGGTGGGT AAATCGGCCC AGCTGCCACT GCAGACCTGG
CTGGCCGACG CGATGGCGGG CCCGACCCCG GTTTCGGCAC TGATCCACGC CGCTACCATG
GTGACCGCGG GCGTGTACCT GATCGCCCGT ACCAACGGCC TGTTCCTGCT GGCACCGGAC
ATCCTGCACC TGGTAGGTGT GGTCGGTGGT GTGACCCTGG TGCTGGCCGG CTTCGCCGCG
TTGGTGCAAA CCGACATCAA GCGTATCCTC GCCTACTCGA CCATGAGCCA GATCGGCTAC
ATGTTCCTGG CCCTGGGCGT AGGTGCCTGG GACGCGGCGA TCTTCCACCT GATGACCCAC
GCCTTCTTCA AGGCCCTGCT GTTCCTTGCC TCCGGTGCGG TGATCGTTGC CTGCCACCAC
GAGCAGAACA TCTTCAAGAT GGGTGGCCTG TGGAAGAAAC TGCCACTGGC CTACGCCAGC
TTCGTGGTCG GTGGCGCAGC CCTGGCTGCC CTGCCGATCG TGACCGTGGG CTTCTACTCC
AAGGACGAGA TCCTCTGGGA AGCCTTCGCC AGCGGCAACA CCGGCTTGCT GTACGCTGGC
CTGGTGGGCG CGTTCATGAC CTCGCTGTAC ACCTTCCGCC TGATCTTCAT CGCCTTCCAC
GGCGAAGCCA AGACCGAAGC CCATGCTGGC CACGGCATCA GCCACTGGCT GCCACTGGGC
GTGCTGATCG TGCTGTCGAC CGCCGTTGGC GCCTGGATTC ACCCGCCGCT GGCAGGCGTG
CTGCCTGAAA GCGCCGGCCA CGCCGGTGGC GAAGCCAAGC ACGCGCTGGA GATCACCTCG
GGTGCCATCG CCATTGCCGG TATCCTGTTG TCGGCCCTGC TGTTCCTGGG CAAGCGCCGC
TTCGTCAGCG CAGTGGCCAA CAGTGGCATC GGCCGCGTCC TGTCGGCCTG GTGGTTCGCC
GCCTGGGGCT TCGACTGGAT CTACGACAAG CTTTTCGTCA AACCGTACCT GCTGATCAGC
CACATCCTGC GCAAGGACCC GGTTGACCGC ACCATCGGCC TGATTCCTCG GATGGCGCGT
GGCGGCCACG TCGCCATGAG CAAGACCGAG ACTGGCCAAC TGCGCTGGTA CACCGCCTCT
ATCGCCGTGG GTGCCGTGCT GGTGCTCGGT GCTGTGGTAG TGGCTGCGGT ATGA
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| Protein sequence | MNLLFLTFVF PLVGFLLLSF SRGRFSENLS ALIGVGSVGL SAATAAYVIW QFNVAPPEGG
AYSQLLWQWM SVDGFAPNFT LYLDGLSVTM LGVVTGVGFL IHLFASWYMR GEAGYSRFFS
YTNLFIASML FLILGDNLLF IYFGWEGVGL CSYLLIGFYY SNRNNGNAAL KAFIVTRIGD
VFMAIGLFIL FAQLGTLNVQ ELLVLAPQKF QAGDTWMVLA TLMLLGGAVG KSAQLPLQTW
LADAMAGPTP VSALIHAATM VTAGVYLIAR TNGLFLLAPD ILHLVGVVGG VTLVLAGFAA
LVQTDIKRIL AYSTMSQIGY MFLALGVGAW DAAIFHLMTH AFFKALLFLA SGAVIVACHH
EQNIFKMGGL WKKLPLAYAS FVVGGAALAA LPIVTVGFYS KDEILWEAFA SGNTGLLYAG
LVGAFMTSLY TFRLIFIAFH GEAKTEAHAG HGISHWLPLG VLIVLSTAVG AWIHPPLAGV
LPESAGHAGG EAKHALEITS GAIAIAGILL SALLFLGKRR FVSAVANSGI GRVLSAWWFA
AWGFDWIYDK LFVKPYLLIS HILRKDPVDR TIGLIPRMAR GGHVAMSKTE TGQLRWYTAS
IAVGAVLVLG AVVVAAV
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