| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3678 |
|---|
| Symbol | |
|---|
| ID | 5871471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4091770 |
|---|
| End bp | 4092267 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641548801 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001669905 |
|---|
| Protein GI | 167034674 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.200599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00000369346 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACC AACCCCTTTC CCTTCAGGCC CTCGCGGCGC CGGAGGGTAC CTGCTACGGC
TGCGGCTGTT CCCACCCAAG CGGCCTGCAC CTGCAAAGTC ACTGGGACGC CGACGGCGTT
CACCTGTTGT GCCGGCACTC GCCCGACAGC ACCTTCATTG GCTGGCCCGG CCTGGTTTAC
GGTGGCCTGC TGGCGATGCT GGTCGACTGC CACTCCAACT GGACAGCCAT GGCCTACCAC
TACCGCAACG AAGGCCGCGA GCCCGGCAGC CTGCCACGTA TAGACTGCGT TACCGGCACA
CTTAACCTGA CCTACCTGAA ACCTACGCCG ATGGGTGTCG AGTTGCTGCT CAAGGCGCGT
GTGGAGGGCG AAGTGGGTCG CAAGAGCCGG GTTATCTGCG AAGTTTGGGC TGGCGACGTG
CTGACCGTGA GCGCCGACTC GGTGTTCGTG CGTGTGGATA CCGAAAAACT CAAACTCAAG
GCCCATGGCC AGGCCTGA
|
|---|
| Protein sequence | MNDQPLSLQA LAAPEGTCYG CGCSHPSGLH LQSHWDADGV HLLCRHSPDS TFIGWPGLVY
GGLLAMLVDC HSNWTAMAYH YRNEGREPGS LPRIDCVTGT LNLTYLKPTP MGVELLLKAR
VEGEVGRKSR VICEVWAGDV LTVSADSVFV RVDTEKLKLK AHGQA
|
|---|
| |