| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3630 |
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| Symbol | nhaB |
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| ID | 5871422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4032812 |
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| End bp | 4034314 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548752 |
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| Product | sodium/proton antiporter |
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| Protein accession | YP_001669857 |
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| Protein GI | 167034626 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3067] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.384067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGCT CCCTGACCGG CGCCCTCGCC CATGGCTTTC TGGGCCAGTC GCCGCTTTGG
TACAAGGCGA TTATCTGCCT GTTCCTGGTG CTCAACCCGC TGCTGCTGGT AACCGTAGGC
CCGGTTGCGG CCGGCTGGGC ACTGGTGCTC GAGTTCATCT TCACCTTGGG CATGGCGCTG
AAGTGCTACC CGTTGATGCC CGGCGGCCTG TTGCTGGTCG AAGCCCTGCT GCTGCAAATG
ACCACACCAC AGGCGTTGTA CGAGGAACTG CAACACAACT TCCCGGTGAT TCTGCTGCTC
ATGTTCATGG TGGCCGGCAT TCACTTCATG AAGGAGCTGC TGCTGTTCCT GTTCTCGCGC
ATCCTGCTTG GGGTGCGCTC GAAGGCAATC CTGTCGCTGC TATTCTGCGT GCTGTCGGCG
TTTCTTTCGG CGTTTCTCGA TGCGCTGACC GTGACGGCGG TAATCATCAG CGCCGCCGTC
GGCTTCTATG CGGTGTACCA CCGCGTCGCG TCCGGGGCCA ATCCGCGTGA AGACAGTGCA
CTGGACAGCG ACCAGCAGGT CGCCCAGCTG CACCGCGAAG ACCTCGACCA GTTCCGCGCC
TTCCTGCGCA GCCTGCTGAT GCATGGCGCG GTGGGCACCG CCCTGGGCGG GGTTTGCACG
TTGGTGGGCG AGCCGCAGAA CCTGCTGATC GGCCACGAAA TGGGTTGGCA CTTCGCCGAT
TTCTTCTTCA AGGTGGCCCC CGTGTCGCTG CCGGTGCTGG GTGCCGGCCT GCTGACCTGC
GTGCTGCTGG AAAAGCTGCG CCTGTTCGGC TATGGCACGT TGATGCCCGA GCCGGTACGC
CAGGTGCTGG CCGCCTATGC GGCCGAAGAC GACGCCGCGC GCACTCAGGC GCAACGCATC
GCACTGTGGG TGCAAGGGCT CGCTGCGCTG ATCCTGATCA TCTGCCTGGG GCTGCATGTG
GCCGAGGTCG GCCTGATTGG CCTGATGGTG ATCGTGCTGA TCACGGCCTT TACCGGTATC
ACCGACGAAC ACCGCCTGGG CCGTGCCTTC CAGGACGCCA TGCCGTTCAC TTCGCTGCTG
GTGGTGTTTT TCGCCGTGGT CGCAGTAATT CACCAGCAGC AACTGTTCAG CCCCTTGATC
AGCTGGGTGC TGACTCTGCC GACCGAGCAG CAACCGGGCA TGCTGTACCT GGCCAACGGT
TTGCTGTCGG CGATAAGCGA CAACGTGTTC GTCGCCACTA TCTATATCAC CGAAGTGAAA
CAGGCATTTC TCAATGGCGG CATGAGCCGC GAGCATTTCG AAACGCTGGC GGTGGCGATC
AACACCGGCA CCAACCTGCC CAGCGTGGCG ACGCCTAACG GGCAGGCGGC GTTTCTGTTT
CTGCTGACCT CGGCGATTGC GCCGTTGATC CGACTGTCGT ATGGCCGGAT GGTGTGGATG
GCGTTGCCCT ATACCGTAGT GATGGGTGGG CTGGGATGGT GGGCAGTGAC CTACTGGCTG
TGA
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| Protein sequence | MSRSLTGALA HGFLGQSPLW YKAIICLFLV LNPLLLVTVG PVAAGWALVL EFIFTLGMAL
KCYPLMPGGL LLVEALLLQM TTPQALYEEL QHNFPVILLL MFMVAGIHFM KELLLFLFSR
ILLGVRSKAI LSLLFCVLSA FLSAFLDALT VTAVIISAAV GFYAVYHRVA SGANPREDSA
LDSDQQVAQL HREDLDQFRA FLRSLLMHGA VGTALGGVCT LVGEPQNLLI GHEMGWHFAD
FFFKVAPVSL PVLGAGLLTC VLLEKLRLFG YGTLMPEPVR QVLAAYAAED DAARTQAQRI
ALWVQGLAAL ILIICLGLHV AEVGLIGLMV IVLITAFTGI TDEHRLGRAF QDAMPFTSLL
VVFFAVVAVI HQQQLFSPLI SWVLTLPTEQ QPGMLYLANG LLSAISDNVF VATIYITEVK
QAFLNGGMSR EHFETLAVAI NTGTNLPSVA TPNGQAAFLF LLTSAIAPLI RLSYGRMVWM
ALPYTVVMGG LGWWAVTYWL
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