| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3550 |
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| Symbol | |
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| ID | 5871339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3951346 |
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| End bp | 3952506 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548669 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001669777 |
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| Protein GI | 167034546 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.732563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.10133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCAG CTGATTGCCT CGACCACCCC GTCATGCCTG CCCACCGCTA TGAACAGTTG
GTTCAGTCGG TGGTGGACTA CGCCATCTAC ATGCTCGACC CCTCCGGCCA TGTGGTGTCG
TGGAATGCCG GCGCGCAACG AATCAAGGGC TACCGTGCCG ATGAAGTGAT CGGCAAGCAT
TTCTCGTTGT TTTTCACCCC GCAGGATTGT GCTGATGGCC GCCCCGAGCG CCTGCTGCGC
CAGGCGCTGG AGCAGGGCGT GGCGCAGGAC GAAGGCTGGC GGGTGCGCAA GGACGGTACG
CAGTTCTGGG CGTTGGCTGC GCTGGATGTG ATCCGCGATG ACAATGGCCA GATCGTCGGC
CTGGCCAAGG TGACCCGCGA CATAACCGAT CGCCGAGAGT CGGCGTTGCA GCTGGACGCG
GTGCGCGCCC AGCTGTTCCA GGCGCAGAAG CTTGAAGCCC TCGGCCAGTT GACCGGTGGC
CTGGCGCACG ACTTCAACAA CATGCTCACC ATCATCATCA GCTCGGCCCG TCTGGCGCTG
GCCACCCAGG ACCCGCTACG CGCCCAGCGC ATGCTGCAGC ACATCCTCGA TGCCGGTCAA
CGCGGCACTG AGCTGACCCA GCAACTGCTC AGCTTTGCCC GCCACCGCAA GCTTGATGTG
GCCAGTGTTG CCCCGGCAGA CCTGGTGACC GCTACCCGTG GTTTGCTTGA GCATGCACTA
CCCAGCTCGA TCGAGCTGAA CGTGCTGCTG CAACCGGACC TGCCGTTGAT CGAGGTGGAT
GCCGGGCAAC TGCAAATGGT CTTGCTCAAC TTGTTGTTCA ATGCCCGTGA TGCCATCGCC
GGTCAGGGCC GGATCGGCCT GACGGTCGAT GTGGTTGAGC TGGCCGGCGA GGTTGAAGCG
TTGCATGGCA ACTTTGTGCG TTTCAAGGTG GAAGACAGCG GTGAAGGCAT ACCCGCCGAG
GTATTGCCAC GTATCTTCGA GCCATTTTTC ACCACCAAGC CGTTTGGCAA GGGCACGGGC
CTGGGGCTTA GCCAGGTGTA TGGCTTCGCC CGGCAGAGTG GCGGCGCCAT TTGTGTCGAC
AGCGAGCCTG GCCGGGGAAC TTGCATGCAA CTGTACTTGC CAATGTATCA GGAGCAGACG
GATAGCCCAC TCGACAGGTA G
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| Protein sequence | MVSADCLDHP VMPAHRYEQL VQSVVDYAIY MLDPSGHVVS WNAGAQRIKG YRADEVIGKH
FSLFFTPQDC ADGRPERLLR QALEQGVAQD EGWRVRKDGT QFWALAALDV IRDDNGQIVG
LAKVTRDITD RRESALQLDA VRAQLFQAQK LEALGQLTGG LAHDFNNMLT IIISSARLAL
ATQDPLRAQR MLQHILDAGQ RGTELTQQLL SFARHRKLDV ASVAPADLVT ATRGLLEHAL
PSSIELNVLL QPDLPLIEVD AGQLQMVLLN LLFNARDAIA GQGRIGLTVD VVELAGEVEA
LHGNFVRFKV EDSGEGIPAE VLPRIFEPFF TTKPFGKGTG LGLSQVYGFA RQSGGAICVD
SEPGRGTCMQ LYLPMYQEQT DSPLDR
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