| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3512 |
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| Symbol | |
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| ID | 5871299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3915128 |
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| End bp | 3916624 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548629 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001669739 |
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| Protein GI | 167034508 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.22516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.430262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTCA ATAACAAGCT CACCGAGCAC CTCAACCGCG GCACGGTCGG TTTCCCCACC
GCACTGGCCA GCACCGTCGG GCTGATCATG GCCAGCCCGG TGATCCTCAC CGCAACCATG
GGCTTTGGCA TCGGCGGCAG CGCCTTCGCT GTGGCCATGG TCATTGCCGC ACTGATGATG
CTGGCGCAAT CCACCACCTT TGCCGAGGCC GCGTCGATCC TGCCGACCAC GGGCTCGGTG
TACGACTACA TCAACTGCGG CATGGGCCGC TTCTTCGCCA TCACCGGCAC ACTGTCGGCC
TACCTGATCG TGCATGTGTT CGCCGGTACC GCCGAAACCA TCCTGTCGGG GGTGATGGCG
CTGGTGAACT TCGAGCACCT CAACACCCTG GCAGAGTCAG CCGGTGGTTC GTGGTTGCTG
GGGGTGTGTT TCGTGGTGGC GTTCGCGGTG CTCAATGCCT TTGGCGTCAG CGCGTTCAGC
CGCGCCGAAG TGGTGCTGAC CTTCGGCATG TGGACCACCT TGATGGTGTT CGGCGTGCTG
GGCCTGATCG CAGCACCTGC GGTGGAGCTG GACGGCCCGT TCGGCGTGTC GCTGGTGGGC
ACCGACCTGA TGACCATCCT GTCGTTGGTC GGCATGGCCA TGTTCATGTT CGTCGGCTGC
GAGTTCGTCA CGCCGCTGGC GCCCGAGCTG CGACGCTCGG CCTGGGTGCT GCCACGGGCC
ATGGCGCTGG GCCTGTTCGG CGTTGCCAGT TGCATGTTCA TCTACGGTGC GGCGATGAAG
CGCCAGGTGG AAAACGTGGT ACTGGATGCC GCCAGTGGCG TGCACCTGCT GGACACGCCC
ATGGCCATCC CGCGCTTCGC CGAGCAGGTG ATGGGCGACA TCGGCCCGGT GTGGCTTGGT
ATCGGATTCC TGTTCGCCGG TGCGGCGACC ATCAACACAC TGATGGCCGG CGTACCGCGC
ATTCTCTATG GCATGGCGGT CGACGGCGCG TTGCCCAAGG TGTTCACCTA CCTGCACCCG
CGCTTCAAGA CGCCGCTGCT GTGCATTCTG GTGGTGGCGT TGATCCCTTG CCTGCATGCC
TGGTACCTGG GTGGCAACCC GGACAACATC CTGCACCTGG TGCTGGCCGC CGTGTGCGCC
TGGAGCACCG CCTACCTGCT GGTGACGCTG TCGGTGGTGA TTTTGCGCAT CCGTCGCCCG
GACCTGCCGC GTGCCTACCG CTCGCCGCTG TTCCCGCTGC CGCAGATCCT CTCGAGCAGC
GGCATCCTGA TCGGCATGGC GTTCATCACG CCGCCAGGCA TGAACCCCGC CGATGTCTAC
GTGCCGTTCG CCATCATGCT CGGTGCTACG GCGGCCTACG CGTTGTTCTG GACGCTGTGC
GTGCAGAAGG TCAACCCGTT CAAGCCGGCG CGGGTCGAGG ATGTGCTTGA GAAAGAATTC
GCCGCCGAAC CTGGCCACGC CGTGGAGCAC CTGCAGCATG ATCAGAAGTT TGCGTGA
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| Protein sequence | MSLNNKLTEH LNRGTVGFPT ALASTVGLIM ASPVILTATM GFGIGGSAFA VAMVIAALMM
LAQSTTFAEA ASILPTTGSV YDYINCGMGR FFAITGTLSA YLIVHVFAGT AETILSGVMA
LVNFEHLNTL AESAGGSWLL GVCFVVAFAV LNAFGVSAFS RAEVVLTFGM WTTLMVFGVL
GLIAAPAVEL DGPFGVSLVG TDLMTILSLV GMAMFMFVGC EFVTPLAPEL RRSAWVLPRA
MALGLFGVAS CMFIYGAAMK RQVENVVLDA ASGVHLLDTP MAIPRFAEQV MGDIGPVWLG
IGFLFAGAAT INTLMAGVPR ILYGMAVDGA LPKVFTYLHP RFKTPLLCIL VVALIPCLHA
WYLGGNPDNI LHLVLAAVCA WSTAYLLVTL SVVILRIRRP DLPRAYRSPL FPLPQILSSS
GILIGMAFIT PPGMNPADVY VPFAIMLGAT AAYALFWTLC VQKVNPFKPA RVEDVLEKEF
AAEPGHAVEH LQHDQKFA
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