| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3507 |
|---|
| Symbol | |
|---|
| ID | 5871294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3911173 |
|---|
| End bp | 3911595 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641548624 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001669734 |
|---|
| Protein GI | 167034503 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0146152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC CAAGACCCTC CCTGACCCTG ACCCTGTTGC AGGCGCGCGA AGCCACCATG
GCGTTTTTCC GCCCAGCGTT GAATGCCCAT GACCTGACCG AGCAGCAATG GCGGGTAATC
CGTATCTTGC GCCAGCAAGG CGAGCTGGAA AGCCATCAGT TGGCTGAACT GGCGTGCATT
CTCAAACCCA GCATGAGTGG TGTGCTCAAG CGCCTGGAAC GCGATGGGAT CGTGGCGCGG
CGCAAGTCGG CAGAAGACCA GCGCCGGGTG TTCATCAACC TGACCGACGC GGGGCAGCAG
GCATTTGTGG CGATGAGTGA GGAAATGGCG CGCAACTACG ACAAGATCCT CGCCCAGTTT
GGCGAGGACA AGCTGCAGCA ACTGATGCAG TTGCTGGATG AAATGAAGCG GATCAAACCC
TGA
|
|---|
| Protein sequence | MTTPRPSLTL TLLQAREATM AFFRPALNAH DLTEQQWRVI RILRQQGELE SHQLAELACI
LKPSMSGVLK RLERDGIVAR RKSAEDQRRV FINLTDAGQQ AFVAMSEEMA RNYDKILAQF
GEDKLQQLMQ LLDEMKRIKP
|
|---|
| |