| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3501 |
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| Symbol | |
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| ID | 5871288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3905190 |
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| End bp | 3906497 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641548618 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669728 |
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| Protein GI | 167034497 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAC TCGAACACGC CTCGCCACGC GAGGCACACA CTGAAAGGGT CGACAGTACC
CACCGGGCAG TCACCTGGCG GCTGATGCCG CTGCTGCTGG TGTGCTACCT GTTCGCCCAC
CTGGACCGCA TCAACATCGG CTTCGCCAAG ATGCAGATGA GCCAGGACCT GCATTTGTCC
GACACCGTCT ACGGCCTGGG TGCCGGGCTG TTCTTCATCG CCTATGCGCT GTTTGGCGTA
CCCAGCAACC TCATGCTCGA CCGGGTCGGC CCACGCCGCT GGATCGCCTG CCTGATGGTG
GTGTGGGGGT TGTTGTCGAC CAGCATGCTG CTGATCGAAA GCAGCAGCGC GTTCTACCTG
CTGCGCTTCG CCCTGGGCGC GGCGGAGGCC GGGTTCTTCC CAGGTATCCT GGTCTACCTC
AACCGCTGGT ACCCGGCCGG GCGGCGCGCC CAGGTGACGG CGCTGTTCGC CATTGCCGTG
CCATTGGCCG GAGTCGTCGG CGGGCCGGTG TCCGGGGCCA TCCTGGCCTT CATGCACGAC
ACCGCAGGGC TGCGTGGCTG GCAGTGGATG TTCCTGCTCG AAGGCGCACC TGTGGTGCTG
CTGGGCCTGG TGGTGCTGGC CGTGCTGCCG GAGCATTTCG AAAAGGTGAG CTGGCTGGAC
GATCAGCAGA AAGCCACGCT GCGCGCGCAA TTCGGTGAGG AAGAACAGCG CAAGCCGGTG
ACCTCGTTCA GCGCCATTTT CGCCAGCCGT GCACTGTGGC TGCTGGTGGC GGTGTATTGC
GCGGTGATGC TGGCGGTCAA CACCCTGGCG TTCTGGATGC CCAGCCTGAT CCACAGTGCC
GGGGTGGCCA GCGACGCCAG TGTCGGCCTG CTCAGCGCTG TGCCGTACGT GGCCGGCTGC
GTGTTCATGC TGGCCTGCGG CCGCTCCAGC GACCGCCTGC GCGAACGCCG CTGGCACCTG
TGCGTCCCCC TGCTGATGGC CGCCACCGGC ATCGCCATCG CAGCCCTTGC CCCCGAGCAG
GCGTGGCCGG TAATGGCCGG CCTGGTGCTG GCCGGCATGG GCGCCAGCGC TGCGCTGCCG
ATGTTCTGGC AACTGCCGCC GGCCTTCCTC AACGCCCGCA CCCAGGCCGC CGGCATTGCT
CTGATCAGCT CGCTGGGCAG CATCGCCTCG TTCTTCACGC CCTACTTCAT CGGCTGGGTG
CGCGACACCA CCCACAGCGC CAGCCTGGCC CTGTATGTGC TCGCCATCTT CATCGCCCTG
GGTGGCCTGC TGGTGCTGCG CACCCGAGCT GCCATCGTCA ACCCTTGA
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| Protein sequence | MSTLEHASPR EAHTERVDST HRAVTWRLMP LLLVCYLFAH LDRINIGFAK MQMSQDLHLS
DTVYGLGAGL FFIAYALFGV PSNLMLDRVG PRRWIACLMV VWGLLSTSML LIESSSAFYL
LRFALGAAEA GFFPGILVYL NRWYPAGRRA QVTALFAIAV PLAGVVGGPV SGAILAFMHD
TAGLRGWQWM FLLEGAPVVL LGLVVLAVLP EHFEKVSWLD DQQKATLRAQ FGEEEQRKPV
TSFSAIFASR ALWLLVAVYC AVMLAVNTLA FWMPSLIHSA GVASDASVGL LSAVPYVAGC
VFMLACGRSS DRLRERRWHL CVPLLMAATG IAIAALAPEQ AWPVMAGLVL AGMGASAALP
MFWQLPPAFL NARTQAAGIA LISSLGSIAS FFTPYFIGWV RDTTHSASLA LYVLAIFIAL
GGLLVLRTRA AIVNP
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