Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3393 |
Symbol | |
ID | 5871178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3831043 |
End bp | 3831441 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641548508 |
Product | hypothetical protein |
Protein accession | YP_001669620 |
Protein GI | 167034389 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.453472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000765779 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCTACC GAGACTGGAC CACACGCCTC AGCGAAGTAA TCAAGGCCGC CCTAGAGCGG CCTTTTTCAT GGGGCGAATT TGACTGCTGC CTGTTCGCTG CTGATTGCGC GGTGGCGGTA TGCGGGATCG ACCCGGCTGA GGCCTATCGT GGCAAGTACA AGACCGAGGC AGGGGCCAAA CGGGCGCTGA AGAAAACCCA CGGCAGCCTT GAGGCGGCAT GGGATGCCTG TTTCACCCGC ATAGCGCCGG CGTTCATCCA GCGCGGCGAC ATCGCCATGT ACGAGGCTCC TGGCGGCCGA GCCATGGCGG TCTTCTGGGC CAATGAATTC TGGGCGACCA CTGACGACGG GGTGGCCCGC GTGGTCTGCG ACCCACTTGC AGTCTGGAGA ACTGAATAA
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Protein sequence | MRYRDWTTRL SEVIKAALER PFSWGEFDCC LFAADCAVAV CGIDPAEAYR GKYKTEAGAK RALKKTHGSL EAAWDACFTR IAPAFIQRGD IAMYEAPGGR AMAVFWANEF WATTDDGVAR VVCDPLAVWR TE
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