| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3372 |
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| Symbol | |
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| ID | 5871157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3807575 |
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| End bp | 3808966 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641548488 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001669600 |
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| Protein GI | 167034369 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.249173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTC AATCTTCACA CCAGCTGAAG CGGGGTCTGT CTACCCGACA TATTCGTTTC
ATGGCGTTAG GCTCCGCTAT TGGCACCGGG CTGTTCTACG GTTCGGCATC GGCAATAAAA
CTGGCAGGCC CTTCTGTTTT ACTTGCCTAC CTCATAGGTG GTGCAGCCAT TTACATGATG
ATGCGCGCCC TCGGCGAAAT GGCGGTTCAT AACCCGGTAT CTGGCTCGTT CGGACACTAT
GCCAGCCAGT ATCTAGGTCG TTACTTTGGT TTTCTGACGG GTTGGAGCTA CGCGTTCTCG
ATGTTGGTGG TGTGCCTGGC GGATGTGACC GCGTTTGGTG TCTACATGGG GCTGTGGTTC
CCTGAAACAC CCGCCTGGAT CTGGGTGCTC GGGATCGTCT TCTTTATCGG GGCGCTGAAC
CTGTGTAGCG TGAAAGTGTT CGGCGAAATG GAGTTTTGGC TGTCGTTGCT GAAGGTGACC
GCTATCGTTG CCATGATTGT GGCAGGCGGG GCTGTACTGC TGCTGGGCAT CCAGTTGAAT
GACGATGCGG GCACGGTTGC CGGTATCTCG AACCTGTGGA GCCACGGCGG GTTCTTCCCC
AATGGCATCG GTGGGATGAT TGCTTCCTTC ACTGTCGTCA TGTTCGCCTT TGGCGGGGTC
GAAATGATCG GCATCACGGC AGGCGAAGCA AGGGACCCAA AGCGCGTGCT GCCAAAGGCG
ATCAATTCAG TGCCGTTGCG CATCCTCTTG TTCTATATCC TCACCCTGTT GGTACTTATG
TCCATTTACC CTTGGACCGG TATTGGCAGC CACGGCAGCC CGTTCGTACA GATCTTCAGT
GGCCTGGGCA TCAGTTCCGC GGCCACCGTG TTGAACATCG TGGTCATTTC CGCTGCTGTT
TCAGCGATCA ATAGCGACAT TTTCAGTGCC GGGCGCATGA TGTACGGCAT GGCGCAAAAC
GGCCAGGCGC CTGCCGGCTT CGCCTCACTG TCGCGTTTCG GCGTGCCGTG GATGACGGTT
GCTGTCATGG GTGTCGCACT GCTACTGGGC GTGGTATTGA ACTACTTGGT GCCAGAAGGC
TTGTTTCTGG TGCTTGCCGC AGTCGTCACC TTCTCCATTG TCTGGGTCTG GTTGATGATT
CTGCTGTCGC AAGTGGCCAT GCGGCGTGGC ATGAGCAAGG AGGAGGTTGC TGCACTGGAT
TATCGAGTGC CACTGTGGCC AGTAGGGCCC GCTTGCGCGA TTGCTTTCAT GGTCTTCATT
TTTGGCGTTC TTGGTTGGTT CCCAGCCAGC CGCACGGCCA TGTACGTCGG GGTAGGCTGG
TTGATCCTGC TATCCCTGGG CTATTGGCTT TGGGGCGTGC GTACACCACG CCCGGTGTCT
GCCAGCGCTT AG
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| Protein sequence | MNAQSSHQLK RGLSTRHIRF MALGSAIGTG LFYGSASAIK LAGPSVLLAY LIGGAAIYMM
MRALGEMAVH NPVSGSFGHY ASQYLGRYFG FLTGWSYAFS MLVVCLADVT AFGVYMGLWF
PETPAWIWVL GIVFFIGALN LCSVKVFGEM EFWLSLLKVT AIVAMIVAGG AVLLLGIQLN
DDAGTVAGIS NLWSHGGFFP NGIGGMIASF TVVMFAFGGV EMIGITAGEA RDPKRVLPKA
INSVPLRILL FYILTLLVLM SIYPWTGIGS HGSPFVQIFS GLGISSAATV LNIVVISAAV
SAINSDIFSA GRMMYGMAQN GQAPAGFASL SRFGVPWMTV AVMGVALLLG VVLNYLVPEG
LFLVLAAVVT FSIVWVWLMI LLSQVAMRRG MSKEEVAALD YRVPLWPVGP ACAIAFMVFI
FGVLGWFPAS RTAMYVGVGW LILLSLGYWL WGVRTPRPVS ASA
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