| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3333 |
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| Symbol | |
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| ID | 5871118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3745183 |
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| End bp | 3747759 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548449 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001669561 |
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| Protein GI | 167034330 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.198214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCG TTACCTTGCT GCACCCAAAA TTCCAGCCTA GCGCCCTGGC GCTGGCCATC
CTGGCCACCA GCACACCCAT GGCCTTCGCC GAAGACACCC AACTGCAAAC CGTCACCGTG
CAGGCCGAAC AAACCGACGA CGACGCCCTG CCCACCCGTC CGCCCGCTTC GATCTATGGC
GGCCTGGAAG CCAAGGTGCT GGACACCCCG CGCTCAGTCA CCCAGATCAA CGCCGAACAA
CTGGCCAACG ACCCGATCCG CAGCTCCGAC GACCTGGTCA AATACGCCCC CGGCATCACC
CGCGGCGGTG GCCAGAACGC CGGTATCGCC CCGCAGATGC GCGGGCAGAA CACCGAGGTG
TTCCAGGACG GCCAGCGCGC CTACGGTGTA CGTCACCCGG CCAATTTCAA CGCCTACGAA
GGCGCCGACA TCGTCGCCGG CCCATCGTCG GTCACCTACG GCTCGGTCAG CGGCAGTGGC
GGCTACGTCA ATTACCTGAG CAAGAAGCCC GATTTCAACC GCTTTCGTAC CAAGCTCAGC
GGTGAGATCG GCAGCTGGAT CCCCGATGGC GAGTCCCGCG ATGCCACCAA GTTCAGCATC
GACAACACCG GCCCGCTGAG CGACAACCTG GCCTACCGGG TAAGCATTAC CCGCCAGCGT
CAGGAAGACT TCTACGACAA CGTCGAGAAC AACTTCGACG CTTTCTACGG CGCCCTCGCC
TGGCGCAATG ACAACCTGCG GGTGGACTGG AACGCCGCCT ACGACGACTA CTACGACTAC
AACATCACCC ACGGCTGGAA CCGCGCCAGC CAGGGCCTGG TCGACCACGG CAAGTACTAC
GCCGGCCGCG CCACGCCGAT CATTCAGAAT GGCAATACCT TGTGGTCGCC GGTGCTGTCC
TCTGGCGCCG CCGATGCCCA AGTCCTCGGT TGGGTACAAC GCCAGCGCAA TGCCCAGGGC
CAGTACGCGG TGGTCAACGG CAGTTTCCAG GGCGCCTCGC CCAACACCCA GGCCAACCCC
GGCAGCCTGC GTGGTTGGGT CTACGACCCC TCGCTTGCAG GTAACGGCCT GACTTCGCTG
TCATCGCAGA CCGGCCAGCG CGCGCAAGAC GAAAACCGCT CGCGGCGCTT CACCACGCAA
CTGCGCGTCG AAGGCGACCT GACCTCGTCG ATCACCCTGG CCAACAGCAC CTTCTACCAA
CACTCCACCG ACACCACCGA CGCCGTGGGC GCGTTCCAGG TGCAGGGCAA GGACGACATC
TTCGACAACC GCTTCGAGTT CCGCGCGCGC GGCCAGTGGC AGTTGGGCGA CCTGACCCTG
ATCGACGACA GCAACACCGG GCTTATCTAC CGCCGCGAGC GCAACGAGTC AATCGCCGCC
AACAACAGCT TCGGCAGTAC CATCAACGCC TATGACCTGA CCCTCGACCC GACCTTGAAG
AACCCCGGCG ACCTGCTCGG CCTGAGCGGC CGCAACCCAG CTGGCGGCAA CGCTGCCTGG
ATCGGCCAAC CCGGTGTGCC GCAATTCTCC AGCTATTACG GCTGGCTCAA CCTGCCCGCC
ATGTACCCGG CAGGGCACGG CCTGTATGCC GAATCGGTAG CGCCGTACAC CGCAGACAGC
ACCTGGACCA CCAAGACCCT GTTCAGCCAG CACAACCTGC GCCTGGGCGA GCGTGTAGGC
CTGAACGTCG GCGCCAGCCG CAGCTGGATA GACGCACGCA TCGAAAACCC ATTCGTGCTG
CCCGGCGGCA ACCCGCGCAA GGACGCGAAC AACTACCGGT TGTTTTCGGT GCAGGTCAGC
CCCTATTTCA AACCCACGGA CAACAGCACA CTGTATTACA CCTTCGATCG CTCGCTGGCG
GTGAACACCG GCTTCTTCAC CAACGGCCTG GGCTGGGGCA GTGGCAGCGG GGCCAACCAG
CTCAACCCGC TGGCCTTCGA GAGCCTGAGC GTGTTGCATG AGGTGGGCTT GAAGGTGGAG
GCAGTGCCCG ACCAGCTGTT TCTGACCCTG GCGGCCTACC GGCAAGCCCG CGACCAGTCG
CCGGACAGCA ACAACAATAT TGCCCGGCTG ATCGTCAAAG GCTGGGAAGC AACCCTGCGC
TACCAGGACC AGCACCTGCG CGGCGGCCTC AACCTCAGCC GCATCAGTGC CTACAACGAG
TTCACCAGCC AAGCGGGGTT TGCCTCGGCG GGGTTCATCC CCGACAACGG CACCGTATTC
GGCGACAACA ACAGCCTCAA CCAGCGCCCG TCCGGCAAGT TCGATGCCGT GCAGATCCCC
GAATACAACG CCGGCGGCTA TGTCGACTAC CGCTTCGATT CGGGGTTTGG CGTCGAGCTT
TCCGGCTGGT GGACCAGCAG TTGGTACCTG AACCTGAGCA AGACGGTGAA AGTGCCGGAC
GAATACAACC TCGACCTTGC CGTGTACTAC CGCCAGCCCC AGTGGGGCGT AACGGTGCGC
ATGCTCAACG TCACCGACGA GCTGAATTTC GTCAGTGGCC TGGCAGGTTC CACCAACACT
TTCCTGCAAC CGATGCCGGG CCGCACGCTG CTGGCCCAGG TCGATTACCA GTTCTGA
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| Protein sequence | MPRVTLLHPK FQPSALALAI LATSTPMAFA EDTQLQTVTV QAEQTDDDAL PTRPPASIYG
GLEAKVLDTP RSVTQINAEQ LANDPIRSSD DLVKYAPGIT RGGGQNAGIA PQMRGQNTEV
FQDGQRAYGV RHPANFNAYE GADIVAGPSS VTYGSVSGSG GYVNYLSKKP DFNRFRTKLS
GEIGSWIPDG ESRDATKFSI DNTGPLSDNL AYRVSITRQR QEDFYDNVEN NFDAFYGALA
WRNDNLRVDW NAAYDDYYDY NITHGWNRAS QGLVDHGKYY AGRATPIIQN GNTLWSPVLS
SGAADAQVLG WVQRQRNAQG QYAVVNGSFQ GASPNTQANP GSLRGWVYDP SLAGNGLTSL
SSQTGQRAQD ENRSRRFTTQ LRVEGDLTSS ITLANSTFYQ HSTDTTDAVG AFQVQGKDDI
FDNRFEFRAR GQWQLGDLTL IDDSNTGLIY RRERNESIAA NNSFGSTINA YDLTLDPTLK
NPGDLLGLSG RNPAGGNAAW IGQPGVPQFS SYYGWLNLPA MYPAGHGLYA ESVAPYTADS
TWTTKTLFSQ HNLRLGERVG LNVGASRSWI DARIENPFVL PGGNPRKDAN NYRLFSVQVS
PYFKPTDNST LYYTFDRSLA VNTGFFTNGL GWGSGSGANQ LNPLAFESLS VLHEVGLKVE
AVPDQLFLTL AAYRQARDQS PDSNNNIARL IVKGWEATLR YQDQHLRGGL NLSRISAYNE
FTSQAGFASA GFIPDNGTVF GDNNSLNQRP SGKFDAVQIP EYNAGGYVDY RFDSGFGVEL
SGWWTSSWYL NLSKTVKVPD EYNLDLAVYY RQPQWGVTVR MLNVTDELNF VSGLAGSTNT
FLQPMPGRTL LAQVDYQF
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