| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3303 |
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| Symbol | |
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| ID | 5871088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3706293 |
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| End bp | 3708737 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548419 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001669531 |
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| Protein GI | 167034300 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.655382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTTG TTTTGATTTT CAACGGAGTG ACCGTGGCCC ACGAGCAACC CCAGGCCCTC
GCCGACCTTA CCCCTCCTGC CCAGTTGCCC TGGTTTCGCC GCCTGGTCGC CCGCCTGCTG
GGGCGTGGCC TGACCCGCTT GCAGGCCCAG CACCGTGACT CCTGGTCCCT CGGCCACGCC
ACTGGCTATG AGGCTGGTCG CCAGGTGTTG GTGATTCGCG ATTCGCGCCC CGACACAACC
GCTGTGCCTG GCCAGGACGA CAACCTGTTC GACGACTGGC GCCTGCCGTT GACAGCCGAG
CTGAAGAAGC GCTTCAAGGC GGATGTCGCC CAGCGCCTGC CTACCGAGGC GCAGCCCAGC
GCCGCGCAAT GGAAGCTGAT CTTCAGTGAC ACCCCTTCCA CCTGCGTGGT GGCAGGCGCC
GGGGCAGGCA AGTCCACATC GTTGGTGCTG CGCATCCTGC TGTTACGCCA TTACCTGGGC
TATGAGCTGG ATGCAATGAC CGTGGTGACC TTCACCCGCG AGTCGCGTAA GGACTTCATC
AAGCGCCTGT TGCAGGTCTT CGCCCTGTGG CAGATCAACC TGCAACCGGT GCAGGCCCGC
GAGCTGGTGC GCACCTTCCA TTCGCGCATC CTGCCGCTGG TGCGCAGCCT GCCGGGCTTC
GGCCAGGTGC GAGCATTCGA AACACTGGGC AACGAGATGC CTGCAGGGCG TGAAGCCGAG
GCTGACAGCA ACCCGTTCGA TCTGCGCCTG AACGACGCCC AGCGCCAGCA GCTCAACCAG
TGCTACAGCA GCTTGCTGGG CGAGAGCCCG CGTTTTGCCG AGCTGGTAGG CCTGTTGCGC
AGCGAAGCGT TGCAGCTCAA ACCGCTGGAC CCGAACAACC CCGACGTGCA GAAGCGCGCC
CAGGTAACCC AATTGGCGGC CCAGCGCGAC GATGAACTGT GCGACGTGAT CGAGGACCTG
TGGTTCGCTG CCGGTGCCTG GCCGATCAAG GGCATCGAAC CCTGCCGCGA AACCGTCGAC
ATCCGTGGCA GCCGCTTTCA TGTGCATGGC CGTCTGCAAA GCCAGGGGCC GTTGGTGGTG
CTGGGCTTCG ACCCGGCGGA AAGCGCGCAG TACCAGCGCC CTGGCGCCAA GCTGGCAGTG
CGTGCGGAGT GGGCGGTCAA GCGCACGCTG TTGCAGGCTT TCTGCGACAG GCCACTGATC
TGGCTGGACA ACTACGCCAT GGCCCGGCGC CTGGCCGCAT CGTTGGCAGG CGATGCGGTG
GCTGGCCCCG GCTTCGAGTA CAAGGTCAAG GGTGAATTGG CCCCGGCGCC ACTGCTGGAT
GCATTCGTCA GCGCGGCCAA CTTCATCGAG AACCTTGGCC TGGACGTTAA CAACGCGGTG
GCGGCCATGA GCTTCCCGTC CGGCGACAGT GATGCACGGT TCTTCGAAGC CCTGGCGCTG
TATTGGAAAG CGCTGGAAAT GCACCTGCTG GACCAGTCGC CGCCGGTGAT GAGCTACAAC
CGCATGTTCG CGCTGTTCGG CGAAAACAAC CCGGAAAACC TGCAACTGCT GCCCGACCCG
TTGCTGCGGC CATTGGCGCA CCTGATGATC GACGAGTTCC AGGATGTGTC GCCGCAGATC
GTCAGTTGGC TGCGTGCCAG CCTCGCCGAA ATCCGCCGAC GCGGCCCGGC CATGCATACT
GGGCGCCACG CCCAGCATTC GTCGCTGCTG TGCGTGGGTG ACGACTGGCA GTCGATCTAC
GGCTGGCGTG GCAGTTCGCC CAAGTACTTC ATGGAGTTCA CCAAGGCCTT CCCGTCACCG
GCCAATACGC GGGTAATGCT GGTCGACAAC TATCGCTGCC AGCAGCAGGT GATCGACGCA
GCGGAGCACC TGGTCAAGGG CACCCCAGCG ATTGCCGGCA AGAAAGCCCG TGCCAGTGGC
CCGGCGGCCG AGCTGCCCGG CTCGCCGGTC AAGGTGTTCG ACCGTGACGA GGCCGCCCTG
GGCGAAACGC TGATCGAGCA TTACCAGCGC GGTGAGACGG TCATGATGCT GTACCGCAAA
GGCAGCGACA GGGCCTTGAT GGCCGAGCAC CTGCAAGGCG TATTGCACGC CGACGCGGCG
CTGCCGGCCG AACAGCGTCG GCTGCGCCAA CTGACTTACC ACAGTGCCAA GGGCCTGCAG
GCCGATGCGG TGTTCATGCT GGGCGACTGC CAGTACCTGA CCAGCTCGCC GTACAAGAAT
CAGGTGTATC GCCAAGCCGG CTTGGGCAAG GCTGGTGATG CGCAGGCGTT CGATACGGCG
CAGAAGGAAG AGGTGCAGCG CCTGGCCTAT GTGGCGGTGA CCCGCGCGGT GCAGCACTGC
TACTGGCATG TGGAGGCCGC CAACGGCGAT GCCGCGGTGG CCCCACGGGC GTCGAGCCAA
GTGGATGGCA GACAGGCCTT TTTCGAAGAC CTGCGCGGGC AGTAG
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| Protein sequence | MPVVLIFNGV TVAHEQPQAL ADLTPPAQLP WFRRLVARLL GRGLTRLQAQ HRDSWSLGHA
TGYEAGRQVL VIRDSRPDTT AVPGQDDNLF DDWRLPLTAE LKKRFKADVA QRLPTEAQPS
AAQWKLIFSD TPSTCVVAGA GAGKSTSLVL RILLLRHYLG YELDAMTVVT FTRESRKDFI
KRLLQVFALW QINLQPVQAR ELVRTFHSRI LPLVRSLPGF GQVRAFETLG NEMPAGREAE
ADSNPFDLRL NDAQRQQLNQ CYSSLLGESP RFAELVGLLR SEALQLKPLD PNNPDVQKRA
QVTQLAAQRD DELCDVIEDL WFAAGAWPIK GIEPCRETVD IRGSRFHVHG RLQSQGPLVV
LGFDPAESAQ YQRPGAKLAV RAEWAVKRTL LQAFCDRPLI WLDNYAMARR LAASLAGDAV
AGPGFEYKVK GELAPAPLLD AFVSAANFIE NLGLDVNNAV AAMSFPSGDS DARFFEALAL
YWKALEMHLL DQSPPVMSYN RMFALFGENN PENLQLLPDP LLRPLAHLMI DEFQDVSPQI
VSWLRASLAE IRRRGPAMHT GRHAQHSSLL CVGDDWQSIY GWRGSSPKYF MEFTKAFPSP
ANTRVMLVDN YRCQQQVIDA AEHLVKGTPA IAGKKARASG PAAELPGSPV KVFDRDEAAL
GETLIEHYQR GETVMMLYRK GSDRALMAEH LQGVLHADAA LPAEQRRLRQ LTYHSAKGLQ
ADAVFMLGDC QYLTSSPYKN QVYRQAGLGK AGDAQAFDTA QKEEVQRLAY VAVTRAVQHC
YWHVEAANGD AAVAPRASSQ VDGRQAFFED LRGQ
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