| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3224 |
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| Symbol | |
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| ID | 5871009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3612561 |
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| End bp | 3613064 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641548340 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001669452 |
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| Protein GI | 167034221 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGAA GCACGGGATC TGTCGCACCA AAAGAGCGCG TCAATATCAA GTATGTCCCC
GCCACGAGCG ATATGCAGGC TGAGGTGGAG TTACCTCACA AAATGCTGGT TCTGGGAGAC
TTCGGCCTGA ATGACAACCG TGCGCTTGAG GACCGTCAGG CCATGCGCAT CGATAAACAC
ACATTCAACA GCGTGTTGAG CGACGCCAAC GTGAGCCTGG ACGTGTCTGT GCCGTCCATG
CTCGGCACAA CCCCGGACGC CGACCTGGGG GTTCACCTGC AATTCAAGTC CATCAACGAT
TTCGGGCCGG ACCAAATCGC ACGCCAGGTA CCCGAGCTGA ACAAGCTGCT GGAACTGCGT
GAAGCGCTGG TCGCCCTGAA GGGCCCATTG GGCAACGTCC CCGTTTTTCG CAAGCAATTG
CAGCACCTGC TGAACAACGA GCAGGCACGT AAACAGCTTG CCCAAGAACT GAACCTGGTA
CTTGAAGCAC CAGAAAATGA CTGA
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| Protein sequence | MSRSTGSVAP KERVNIKYVP ATSDMQAEVE LPHKMLVLGD FGLNDNRALE DRQAMRIDKH
TFNSVLSDAN VSLDVSVPSM LGTTPDADLG VHLQFKSIND FGPDQIARQV PELNKLLELR
EALVALKGPL GNVPVFRKQL QHLLNNEQAR KQLAQELNLV LEAPEND
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