| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3171 |
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| Symbol | |
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| ID | 5870956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3545202 |
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| End bp | 3546077 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548287 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001669399 |
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| Protein GI | 167034168 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.394579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGC TGAAACACAT ACTGGTCGCC ACCGACCTGT CCCCCCATGC CCGCAACGCA
GCAGAGCGCG CTGCCTACCT GAGCAACACG CAGCAGGCCG CACTGGACCT GCTGTACGTT
GCCAACCCGG CCCCCTTCGA GCGCCTCAAG CAACTGGTGG CGCCTGATGA CGACCTGTTG
AAACGGGTAC TGGACAGCGC CGGCGAAAAA ACCCGCACAC TGGCCGCCAT GTTGTTCCAG
CGCTACGACA TTTCTGCGGG TGTGCAGGTT GCCAGTGGTT CGGTGATCAC GGAAATCACC
CGGGTAGTGC AGGACAAACA CAGCAACCTG CTGGTGTGCG GAGCCAAGGG CCAGAGCGTG
GCGCGGCGCC TGCTGCTGGG CTCGACCGTG CAAAAAATGC TCAACCACAT GCCCTGCCCG
TTGTTGGTCG TCAAGCCGGC ACCTCGTGAC GCCTACCGCA CCGTGCTGGT TCCCGTCGAT
TTTTCACCTG TTTCGCTGCG CGCGATCCAA CTGGCCAAGG CCATTGCCCC GCAAGCCGAG
ATCATCCTGC TGCATGCGTA CGAAGCCCCG TTCGAAGGCA GCGTGCGCTT CGCCCATATC
GACCAGGACA CCCTCACCCG CTACCGCAAT GTCATCCGCC AGGATGCAGT GGCACAGTTG
GCCGCATTGA GCGAAGCTGC CGGCGTAGCC GATGCCCGGC AGATCGTGGT GCACGGTGAC
CCTGGCTGGC GCATTGCCGA GCAGGAACAA GAGCTGGAAT GCGACCTGAT CGTGGTCGGC
AAGCAGGGTA CGAGCGCGCT GGAGGAGCTG TTGGTGGGTA GCGTCACCAA GCATGTACTG
GACGAATCGC AGTGTGATGT GCTGGTAACG CCTTAG
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| Protein sequence | MSPLKHILVA TDLSPHARNA AERAAYLSNT QQAALDLLYV ANPAPFERLK QLVAPDDDLL
KRVLDSAGEK TRTLAAMLFQ RYDISAGVQV ASGSVITEIT RVVQDKHSNL LVCGAKGQSV
ARRLLLGSTV QKMLNHMPCP LLVVKPAPRD AYRTVLVPVD FSPVSLRAIQ LAKAIAPQAE
IILLHAYEAP FEGSVRFAHI DQDTLTRYRN VIRQDAVAQL AALSEAAGVA DARQIVVHGD
PGWRIAEQEQ ELECDLIVVG KQGTSALEEL LVGSVTKHVL DESQCDVLVT P
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