| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3127 |
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| Symbol | |
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| ID | 5870912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3502847 |
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| End bp | 3503722 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548243 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001669355 |
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| Protein GI | 167034124 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.146879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.378018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGT GGACGGTGCT GTTGAGTGGC CTGCTGCTGT GTTGCGCGGT GGCCCAGGCG
CAGGTGCGCA ACTACGACGC GATCATCGCC GCCGGCGAGT TGAAAGTGGC GGTGTACAAG
GATTTCGCAC CCTACAGTTT CCAGGACCAC GGCCAGCCGC GAGGCGTCGA TGTGGAGCTG
GCACAGGCCC TCGCCACGGC CTTGGGGGTG CGCCTGCAAC TGATTTGGGC ACCGCCTGGA
GAAAAGCTCG ACGATGACCT GCGCGACTAC ATCTGGCGCG GCAGCCCGCT GCGCCACCAG
CAATTGGCCG ACCTGATGAT GCGGGTGCCA TACGATCACG ATTACGCGCA GAAGCGCAAC
GAACTGGGCG AGCTGGAAAA CGCCCAGGTG GTGATGTTCG GCCCCTATCA GCAAGAGCGC
TGGCAGGTGG CCTATGACCA GCGCCGGCTG GCCTCGGTGG CCAGTGTGGC GGTGTTCCAG
CAGCACCCGA TCGGGGTCGA GGTCGACAGC GTGCCGTCGT TCTACCTGAC CTCGGTGTTC
AACGGCATGC TCAGCGCCAA GACCCACCAT TACCCCAACG TGCAGCAGGC ATTTGCCGCG
ATGCAGGCCG GCCAGGTGGA CGCGGTGATG GCGATGCGCG GCGAGGTCGA CTGGCAACTG
CACCAAGCCG CCGACCCGCA ACTGGCCCTG GCGGAAAACG CCTACCCGAA CCTTGGCAAG
CAAGCCTGGG AAATCGGCAT GGCTGTGCAC GAAAGCAACC GGCAGTTGGC CTATGCGGTG
GAGGAGGCCC TCGAGGGCAT GATCCGTGAT GGCCGGCTCA AGGCGATGTA TGCCACTTAC
GGCCTGCGTT ACGAGGTCCC GGAGATGTAT CAATAG
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| Protein sequence | MRLWTVLLSG LLLCCAVAQA QVRNYDAIIA AGELKVAVYK DFAPYSFQDH GQPRGVDVEL
AQALATALGV RLQLIWAPPG EKLDDDLRDY IWRGSPLRHQ QLADLMMRVP YDHDYAQKRN
ELGELENAQV VMFGPYQQER WQVAYDQRRL ASVASVAVFQ QHPIGVEVDS VPSFYLTSVF
NGMLSAKTHH YPNVQQAFAA MQAGQVDAVM AMRGEVDWQL HQAADPQLAL AENAYPNLGK
QAWEIGMAVH ESNRQLAYAV EEALEGMIRD GRLKAMYATY GLRYEVPEMY Q
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