| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3113 |
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| Symbol | |
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| ID | 5870898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3482220 |
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| End bp | 3483167 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548229 |
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| Product | DNA-binding transcriptional regulator DsdC |
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| Protein accession | YP_001669341 |
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| Protein GI | 167034110 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02036] D-serine deaminase transcriptional activator |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.109681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC CCAGCGGCGG CGCCGTGAAA CTCAGTGGCT CGCACCTGGG CAGCCTGCAT
GTCTTTCTGG TGGCCGCACG GCACTTGAGC TTCTCTCGCG CGGCGGATGA GCTGTGCCTG
ACGGCCAGTG CCGTGAGCCA TCGCATCAAT CGACTGGAAG ATGAACTGGC GCTCAAGCTG
TTCCACCGCA TGCCGCGCAA AGTCAGCCTC AGCGAAGACG GCGAGCGCCT GTTCGCGGTC
ATGCAGCGCA CCATGGATGA GCTCAGCGAG GCCGTGCAGG CACGCGCGCA CGCCGAAATC
GCCGGCCAGC TGACGCTGTA TGTACGCCCG TCAGTCGCAC AGTGCTGGCT GGTGCCACGG
CTGGCGCAGT TCACCACCCG TTACCCCGAC ATCCAGCTCG ATATCAGGGT GGGCAACGAG
AGCATCGATT ACCGCACCCG CAAGATCGAC CTGGTCCTCT GTTATTCGGA TGGTCACCAT
CCGGGTTTGC AGAGCATCCA TTTGATGAAC GAGCGAATCG CCCCGGTGTG CTCCCCTCAT
TACGCTCAGA CCCATGCATT GGCCAATGAC CTGAACCGGC TGGATCAATG CACCACATTG
CATGATGTAG CGGCCTGGGA CAACGCTGCA TTCGATGCCG AATGGCAGCT CTGGGCCAGC
ACCACAGGTG CGCGTATCAG CCTCCCGCGC CGGTTCCTCA CCTTCGATTG CTCCGACCTT
TGCACGCTCG CGGCACTGAA CCACACAGGC GTCGCGATCG GCCGGGAACA ACTGGTCAGA
ACGCGCATTG CGCAAGGTGA ACTGGTCCTG CCGTTCGGCG GTTTCGTCGA CACCCCCAAC
TATGGCTATT ACCTGGTCTA CCCGCATCAT GACCCGATGC CCAAACGCCT GCAGGTGTTG
ATCGACTGGC TCGTGGAATG CGCCCAGTCA CCTGGCCCGA ACCCATGA
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| Protein sequence | MKKPSGGAVK LSGSHLGSLH VFLVAARHLS FSRAADELCL TASAVSHRIN RLEDELALKL
FHRMPRKVSL SEDGERLFAV MQRTMDELSE AVQARAHAEI AGQLTLYVRP SVAQCWLVPR
LAQFTTRYPD IQLDIRVGNE SIDYRTRKID LVLCYSDGHH PGLQSIHLMN ERIAPVCSPH
YAQTHALAND LNRLDQCTTL HDVAAWDNAA FDAEWQLWAS TTGARISLPR RFLTFDCSDL
CTLAALNHTG VAIGREQLVR TRIAQGELVL PFGGFVDTPN YGYYLVYPHH DPMPKRLQVL
IDWLVECAQS PGPNP
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