| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3100 |
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| Symbol | |
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| ID | 5870885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3467526 |
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| End bp | 3468995 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548216 |
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| Product | permease for cytosine/purines uracil thiamine allantoin |
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| Protein accession | YP_001669328 |
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| Protein GI | 167034097 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTT CCCGTGAGCA GGAGTTTCGC CTGGGTGCGG AACGTGGTGA CACCCCCTTG
CTGCCCAGTG AGCGGGTGTG GGGTTTTTGG GGCTTTGCCT ACGCCAACTC GGCGCTGGCG
GTGGCTACCT GGGTGTTCCT GATCGGCGGT GCCACGGCGC TGTTCGTCGG CCCCTTGCAA
GGGATTGCGG CGATCATCAT CGGCAACATC ATCGGCGTGG TCCTGGCAGC CTCGTCCACC
TGCCTGCCCT GCGGCAAGTA CGGTGTCGAG CAGTTCACCT TCCTGCGCAG CATGTTCGGC
CTCAATGGCA GCCGCCTGGT CTACTTCCTC TCGGTGGTGG TGCTGACCAT GGGTTGGCTG
GCGGTGCTGG GGCTGATGTG CGGGCGGGCG CTGGACAACC TGCAGACCCT GGTGCACCAG
GCCCAACCCA GCGGCGACGG TTGGCTGGTG ACCGCCGGGG CGTTGCTGGC CATTGTGCTG
GCAGCGCTGG TCGCCATGCG CGGGCCAGAC ATGATCCGCC GCCTGAGTGC GGTGATCGCG
CCCAGCCTGA TCCTGATCAT GCTGGCGCTG ATGTACTTCA TTTCGCGCCG CTACAGCCTT
GACCAGCTGC TGGCCATGCC GCCCTTGCAG CCACCGTTCG AGAACCCGCA CGTCAACTTC
ATGGTCGCGG TGGAAATCAA CATTGCCGCG GGCTTTTCCT GGTGGCCCTA CATCGGCAAC
CTGTCGCGCC TGTGCAGCAA CCAGCGTACC GCCTTCTGGC CCAACCTGGT GGGCATCTTC
GGTGCCGCTT CACTGGGCGA GTCGGTCAGC CTGTTCGCCG CCACCACCCT GGGCAGCAGC
GACCCTACCG CCTGGATGCG CCTGGCCGGT GGCATGGGCT TTGGCATCAT CGCCCTGAGT
TTCCTGGCGC TGGCCAACCT GACCGGCATG GTCAACATCC TCTACACGGC GGTGATCGGC
CTGCGTCAGC TGGCCGGGGA ACGGCTGCGC AGCATGGGCT GGGGGGTATT GATCTCGCTG
TTCTGCATCA TCCCGGTGGT GATCGTGGTG CTGCTGCCGG GTATCTACGA TGGCTTCTTC
ATCTTTTTGG TGTGGACCTC CGCACTCAAC AGCGCCCTGG CCGGCATTGG CATCGCCGAT
TACTTCTTCC TTCGCAAGCA GCGCTTGAAC CTGCGCCAGC TCTACGCCGA ACCAAGCGTG
TCACCCCTGC GCTACTGCAA AGGCTTCAAC CCCATTGCGC TGGTGGCGCT GGTGGCGGGC
TTTGCGATCT ATGTGGTGGT GTTCAACCCG CAGACCCTGG CCCATACCGA CTTCTTCACC
TTCGCCACGG CCTCGCTACC GTCCTGCCTG CTGGCCGGGC TGGTGCATTA CGGCTTGACC
CGACTGCTGG CCGCGCGCCT GGGTTGGGGC GGCTACCCAA AGCGTAACGA ACGCAACATC
GAGGCCGTCG GCCTTCGCGT ACAGGACTAG
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| Protein sequence | MSASREQEFR LGAERGDTPL LPSERVWGFW GFAYANSALA VATWVFLIGG ATALFVGPLQ
GIAAIIIGNI IGVVLAASST CLPCGKYGVE QFTFLRSMFG LNGSRLVYFL SVVVLTMGWL
AVLGLMCGRA LDNLQTLVHQ AQPSGDGWLV TAGALLAIVL AALVAMRGPD MIRRLSAVIA
PSLILIMLAL MYFISRRYSL DQLLAMPPLQ PPFENPHVNF MVAVEINIAA GFSWWPYIGN
LSRLCSNQRT AFWPNLVGIF GAASLGESVS LFAATTLGSS DPTAWMRLAG GMGFGIIALS
FLALANLTGM VNILYTAVIG LRQLAGERLR SMGWGVLISL FCIIPVVIVV LLPGIYDGFF
IFLVWTSALN SALAGIGIAD YFFLRKQRLN LRQLYAEPSV SPLRYCKGFN PIALVALVAG
FAIYVVVFNP QTLAHTDFFT FATASLPSCL LAGLVHYGLT RLLAARLGWG GYPKRNERNI
EAVGLRVQD
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