| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3084 |
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| Symbol | |
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| ID | 5870869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3447904 |
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| End bp | 3449205 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548200 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669312 |
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| Protein GI | 167034081 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAC CGCTACCCGC ATCGCCAAGC TTGCACAAGG GCGCGCATTC TGCCGCGCAG
GCATCGTCTT CACGCAAAAC CTTGATCGCC TGCTCGTTGG GCAATGCGCT GGAAATTTAC
GACTTCACGA TCTACAGCTT CTTTGCTGTA TTGATCGGCA AGCATTTCTT CCCCTCCGAC
TCGGCGATGG CTTCGTTGTT GATGTCGCTG GCCACGTTTG GCGTCGGTTT CCTGATGCGC
CCGGTCGGGG CGATGGTCAT CGGTCGCTAT GCCGACCGGC ATGGGCGCAA AGCGGCATTG
AGCCTGACCA TCGGGCTGAT GACCCTGGGC ACCGCATTGA TTGCCTTTGC CCCCACGTAT
TCGCAGATCG GTATTTTCGC CACGCTGCTG CTGGTAACCG GCCGGCTCAT CCAGGGGATG
TCGGCGGGTG GGGAGATCGG TACCGCGTCG GTGTTCCTGA TGGAGTCCAG TGCGGTTGGC
AACCGCTGCC AGAGCGTGAG CTGGCAGGCC GCCAGCCAAG GCTATGCCGC GTTGGTCGGG
GCCGGCTTTG GCCTGGCCCT CAGCCAATTG CTCGACCCCG CTGCGCTCGA AAGCTGGGGG
TGGCGGATAC CGTTCATTTT CGGCCTGCTG ATCGGGCCGG TCGGTTGGTA CATTCGCACG
CGTTTGCCGG AAACCCACGA GGCCGCGCCG GCGCGCGAAG GGGAGAAGAG GCTGGACGGC
GACCTGCTCA AGCGCATCGC GCTGGGCATC GGCCTGATGG CCAGTTCGAC CATTGGCATG
TACCTGTTCG TGTTCTACAT GCCCACCTAC TTGACCACGG CCTTGCATTA TCCGGCGGGC
AGCGCGATGG CGATTGCCTG TATCAGTAGC GGTTGCATGG CGGTCATCTG CCCGTTGGCG
GGCAAATTCG CCGATAAGTA CCAGCTCAGA AAGCGCCTGC TGGTGTGGAC GGTTGCCGCG
CCAGTGGTGT TGACCTTGCC GGTGTTCTAC CTCTTGGGGC ATGTGCAGCA CATGGGCCTG
GCCATGATGT GTGTGGCAAT TCTGATCCTG CCGACCTGTA TCGGTGCCGG TGCGTTCTTT
GCGCTGATCA TGGAGGGCTT CCCGAAGGCC AGTCGCTCCT TCGGTACTTC GGTCAGCTAC
AGCCTGGGGG TGACGTTGTT CGGCGGCTTT TCTCCGTTGG TGGCCACCTG GCTGATTGCC
GCGCTGGGCA CGCCGTTGGC ACCTGCCTAT TTCCTGCTGG CCGGCGGTGT CGTCAGCCTG
GCCTGCCTCA AAAACTTCCC CGAAAACAAA GGATGCGCGT GA
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| Protein sequence | MTRPLPASPS LHKGAHSAAQ ASSSRKTLIA CSLGNALEIY DFTIYSFFAV LIGKHFFPSD
SAMASLLMSL ATFGVGFLMR PVGAMVIGRY ADRHGRKAAL SLTIGLMTLG TALIAFAPTY
SQIGIFATLL LVTGRLIQGM SAGGEIGTAS VFLMESSAVG NRCQSVSWQA ASQGYAALVG
AGFGLALSQL LDPAALESWG WRIPFIFGLL IGPVGWYIRT RLPETHEAAP AREGEKRLDG
DLLKRIALGI GLMASSTIGM YLFVFYMPTY LTTALHYPAG SAMAIACISS GCMAVICPLA
GKFADKYQLR KRLLVWTVAA PVVLTLPVFY LLGHVQHMGL AMMCVAILIL PTCIGAGAFF
ALIMEGFPKA SRSFGTSVSY SLGVTLFGGF SPLVATWLIA ALGTPLAPAY FLLAGGVVSL
ACLKNFPENK GCA
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