| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3076 |
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| Symbol | |
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| ID | 5870861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3441257 |
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| End bp | 3442765 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548192 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001669304 |
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| Protein GI | 167034073 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.240907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTAT CGACATTGAA AAGCCTGAGC ACCGTCACAG CCCTCGGCCT GCTGCTCGGC
GCCTGCTCGG CCTTCGAGCC CAAGCCCTAC AGTGAAGACG AAATGCGTCA GCGGGTCATC
GAGGACCAGG CGCGCATGTA CAAGGAACAG GAACCGGTCA ACGGGCCGAT TACCTTCTAC
GAAGCGTCGG CGCGGGCCCT GAAATACAAC CTCGACTATC GCCTGAAACT GCTGGAGAGC
GCCCTGGCCT CGGACCTGCG CGATGTTTCC AGCCACGAGA TGCTGCCGCG CTTGGTCGCC
TCCGCCGGCT ACGCCGGGCG CAACAACGAT TCCGGCGGCA CCTCGATCGG CATCGAAGAC
CGCCAGGTCA GCTTGCGCCC GTCCACCTCC GAGGAGCGCT ACCGCACGCT TTACAGCCTC
GGCCTGTCAT GGAGCCTGCT GGACTTCGGT GTTGCCTACT TCCGCACCCA GCAAAAGAAC
GACCAGATGC TGATGGCCGA GGAACGCCGG GAAAAGGTGG CGCAAAACGT CCTGCAGGAC
GTGCGCAACG CCTATTGGCG TGCCCTCGGT GCGCAACGCC TGCTGCCGGA AGTGGACGGC
CTGCTGATGC GTACCCACCG TGCCCTGACC TCTGCCCGTG AAGCCGAGGG CCGTGGCCTG
CTGCCGCGCC AGGACATCCT CGCCTACCAA CGCGCCCTGC TCGACTCGGT GTACATGCTC
ACCGTGCGCC GCCAGGACCT GGAGTTCGCC CGCGCCGAAC TGGCCGCGCT GATGTCGCTG
CCGCCGAACA CCCGCATGGT GCTGGCCGAC ACCAACGAGC AGCCGCTGCC ACTGCTCAAC
GGCAACATGG AAAAACTCGA ACGCCTGTCG TTGGAGCGCC GCCCGGAAAT CATGGAAGAG
TGGTACCGCA AGCGCGTGAG CATGAACGAC CTGAAGATCG CCAAGGCCCA GTTGTGGCCC
AACGTGAGCT TCAACTACGG CTACGAGTAC GACTCCAACA AGTACCTGTA CAACAGCGAC
TGGAACCAGA CCGGCATCAA TGTCTCGCTG AACCTGCTGC GCCTGCTGCA ATACCCCGAC
ATCACCGCTG CGGAAAAAAG CCAGGAAAAG ACCGACGACA TGCGCCGCAC GGCGTTGTCC
ATGGCCATCC TCACCCAGGT CCGCGTGGGC CTGCTGCGCT ACCAGCTGGC CCGCCAGGAA
GTGGACTTCG CCGACGAAAG CCTGCGCGTC GATCAAAGCC TGCTGGACTA CGCCCGTTCC
TCGCGCAGCG CCGCATTGGG TAGCGAGCTG GAACTGATCC GCGCCGAAGG CCGCCTGCTG
CTGTCACGCT ACCAGCGCGA GGCGGCCTAC TCCGATGCAC AGGCCGCCTG GGGGCGGTTG
TACAACTCGG TTGGCTTTGA AGTGATGCCC AAGGAAATCG AGCAGCATGA TGTGAAGACC
TTGGCGCGGG AGATCCAGCG AACGGTCGAG CAGCAGAGCC AGGAAAACCT GATATCCGCT
GCAAAGTGA
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| Protein sequence | MPVSTLKSLS TVTALGLLLG ACSAFEPKPY SEDEMRQRVI EDQARMYKEQ EPVNGPITFY
EASARALKYN LDYRLKLLES ALASDLRDVS SHEMLPRLVA SAGYAGRNND SGGTSIGIED
RQVSLRPSTS EERYRTLYSL GLSWSLLDFG VAYFRTQQKN DQMLMAEERR EKVAQNVLQD
VRNAYWRALG AQRLLPEVDG LLMRTHRALT SAREAEGRGL LPRQDILAYQ RALLDSVYML
TVRRQDLEFA RAELAALMSL PPNTRMVLAD TNEQPLPLLN GNMEKLERLS LERRPEIMEE
WYRKRVSMND LKIAKAQLWP NVSFNYGYEY DSNKYLYNSD WNQTGINVSL NLLRLLQYPD
ITAAEKSQEK TDDMRRTALS MAILTQVRVG LLRYQLARQE VDFADESLRV DQSLLDYARS
SRSAALGSEL ELIRAEGRLL LSRYQREAAY SDAQAAWGRL YNSVGFEVMP KEIEQHDVKT
LAREIQRTVE QQSQENLISA AK
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