Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3063 |
Symbol | |
ID | 5870848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3419432 |
End bp | 3420073 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641548179 |
Product | hypothetical protein |
Protein accession | YP_001669291 |
Protein GI | 167034060 |
COG category | [S] Function unknown |
COG ID | [COG4944] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.473245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCG ATGACCTGAT AGCCCTGCTG GCCGCCGGCG AAGGGCCGGT GCAACGCCAT GCGCTGGCCC GACGCCTGGC ACTGGCGGTG CTGGGCGGTG CGTTGGGTGC GGTACTGATG ACTGTGGCTT TGTACGGTGT GCGCGCCGAC CTGGCATTGG TGGCGCACAC CCCGCTGTTC TGGGCCAAGC TTGCCTTGCC CGGTAGCGTG GCGCTGCTGG CGCTGTGGCT GACCCAGCGG TTGGCCAGGC CTGGAATGAA AGGCGGCGCG CTATGGGGGC TGCTTGGTTT ACCGCTGCTG TTGGTCTGGC TGGGGGCTGC GACGAGCTTG CTCGGTGCCC CAGAGGGTGC CCGTGCCGAG TTGATCCTGG GGCGCACCTG GCGCACCTGC GCCTTGAACA TCGCCTTGCT GTCGGTACCC ACCCTGATTG CCATTGGCTG GGCGCTGCGT GGCCTGGCAC CCATTCACCT GCGTCAGGCG GGCGCGGCGG GCGGTCTGCT GGCAGGTGCC ACGGCTACCC TTGCCTATTG CCTGCATTGC CCGGAAATGG AGGCGCCGTT TTGGGGGCTC TGGTATGTGC TGGGCATGCT GGTGCCGGCT TTGGCGGGCA CCTTGCTCGG GCCACGCCTG CTGCGCTGGT GA
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Protein sequence | MKTDDLIALL AAGEGPVQRH ALARRLALAV LGGALGAVLM TVALYGVRAD LALVAHTPLF WAKLALPGSV ALLALWLTQR LARPGMKGGA LWGLLGLPLL LVWLGAATSL LGAPEGARAE LILGRTWRTC ALNIALLSVP TLIAIGWALR GLAPIHLRQA GAAGGLLAGA TATLAYCLHC PEMEAPFWGL WYVLGMLVPA LAGTLLGPRL LRW
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