Gene PputGB1_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3063 
Symbol 
ID5870848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3419432 
End bp3420073 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content68% 
IMG OID641548179 
Producthypothetical protein 
Protein accessionYP_001669291 
Protein GI167034060 
COG category[S] Function unknown 
COG ID[COG4944] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.473245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCG ATGACCTGAT AGCCCTGCTG GCCGCCGGCG AAGGGCCGGT GCAACGCCAT 
GCGCTGGCCC GACGCCTGGC ACTGGCGGTG CTGGGCGGTG CGTTGGGTGC GGTACTGATG
ACTGTGGCTT TGTACGGTGT GCGCGCCGAC CTGGCATTGG TGGCGCACAC CCCGCTGTTC
TGGGCCAAGC TTGCCTTGCC CGGTAGCGTG GCGCTGCTGG CGCTGTGGCT GACCCAGCGG
TTGGCCAGGC CTGGAATGAA AGGCGGCGCG CTATGGGGGC TGCTTGGTTT ACCGCTGCTG
TTGGTCTGGC TGGGGGCTGC GACGAGCTTG CTCGGTGCCC CAGAGGGTGC CCGTGCCGAG
TTGATCCTGG GGCGCACCTG GCGCACCTGC GCCTTGAACA TCGCCTTGCT GTCGGTACCC
ACCCTGATTG CCATTGGCTG GGCGCTGCGT GGCCTGGCAC CCATTCACCT GCGTCAGGCG
GGCGCGGCGG GCGGTCTGCT GGCAGGTGCC ACGGCTACCC TTGCCTATTG CCTGCATTGC
CCGGAAATGG AGGCGCCGTT TTGGGGGCTC TGGTATGTGC TGGGCATGCT GGTGCCGGCT
TTGGCGGGCA CCTTGCTCGG GCCACGCCTG CTGCGCTGGT GA
 
Protein sequence
MKTDDLIALL AAGEGPVQRH ALARRLALAV LGGALGAVLM TVALYGVRAD LALVAHTPLF 
WAKLALPGSV ALLALWLTQR LARPGMKGGA LWGLLGLPLL LVWLGAATSL LGAPEGARAE
LILGRTWRTC ALNIALLSVP TLIAIGWALR GLAPIHLRQA GAAGGLLAGA TATLAYCLHC
PEMEAPFWGL WYVLGMLVPA LAGTLLGPRL LRW