Gene PputGB1_3059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3059 
Symbol 
ID5870844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3414526 
End bp3416841 
Gene Length2316 bp 
Protein Length771 aa 
Translation table11 
GC content65% 
IMG OID641548175 
ProductTPR repeat-containing protein 
Protein accessionYP_001669287 
Protein GI167034056 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID[TIGR01905] doubled CXXCH domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATGGC GTGCACAGGT GATGCAGGGC GGTTGGGTGG CGCTCTGCCT GGGGGTCCTA 
TTACTCATTT CAAGTGGTGT CAGCCTTGGC GCGGCAGCTG TTGGTGAAGG CCAACTACCT
GCCTTGGCCA AGGACCGCGA GGGCTACGCC GATGCCGACA GTTGCCAGGG CTGCCATGCC
CAGCAGGCCG GGCAGTGGCA GCATTCCGAC CATGCCTGGG CGCTGCGCGA CGCCAGCGCG
GCGAATGTGC TGGGCGACTT CAACGATGTG CACTATGACC AGGACGGGGT CAAGGCACAC
TTCTATCGCA AGGGTGGCGG GTACTTCGTC AACATCGAGG GCGAGGATGG CAGGCCTGCG
GACTTTCAGG TGCTGCATAC CTTTGGCTAC GCGCCGCTGC AACAGTACCT CGTTGCCTTG
TCGCGCGGCC GCCTGCAGGC GCTGACCATT GCCTGGGACA GCCGGCCAGC GGAGCAGGGT
GGGCAACGCT GGTTCTCGCT GTACCCCGGG CAGCGCTTTG CACCGGGCGA TCCGCTGCAC
TGGACCGGCC GCTACCAGAA CTGGAACGGC ATGTGCGCCG ATTGCCATTC GACGCGGCTG
GTCAAGCATT ACGACGATGC CAAGGACAGT TTTGCCAGTA CCTGGCAGGA GAAGACCGTT
GGCTGCCAGG CTTGCCATGG CCCAAGCCAG GCCCATGTCG ACTGGGCCCG CGAGCATCCC
GGCGCTTCGC CAGCCCAGGG GCTGAGCGTG GACGTCAAGG CGTTGGGCAG CAGAGGCCAA
GTGGAACAAT GCGCCTACTG CCACAGCCGT CGGCAGAGCC TGGGCACTGG CCAGATGCCT
GGCCACCCGC ACTTGGACCA GAGTTTGCCG GCCACACTGC GCACCGGCTT GTACCATGAC
GACGGGCAGA TCGACGGCGA GGTCTACGAG TACGGGTCCT TCACCCAGAG CAAGATGTTT
GCCGCCGGGG TCGGTTGCAC CGATTGCCAT GATCCCCATA CCACCCAGGT GCGTATCGAA
GGCAACGGCT TGTGCCTGCA ATGCCACAAC GCTCAACCCA ACACCGCGCG CTTCGCCGGC
CTGCAGGCCA AGGACTACGA CAGCCCCGCA CACCATCACC ATGCCGCCGG CTCACCTGGG
GCGCAGTGCG TGAACTGTCA CATGCCAAGC AAGGATTACA TGGTGATCGA CCCTCGGCGT
GACCACAGCT TGCGCATCCC TCGGCCTGAC CTGGCTGCCC AGGGCATTGG CCCGGATGCT
TGTACCACCT GCCATCAGGG CCGCGAGCCG GCGTGGGCTG CCAGTGCGAT CGATAGCTGG
TTCACCGCAC CCAAGCGCGC GGCCCATTAC GGGCAAGCGT TCCATGGCGT TCGTCAAGAC
CCAGGCACCA GCCTCAGCCG GCTGGGCTAC CTCCTCGCGG ACAAGCACAA CCCTGCGATC
GTGCGGGCAA CGGCTGCCCA GCAACTGGCC GATCTTGGGC CTGCGGCCGC CAGCAATCTG
CGCTGGGCGT TGCAGGACAG TGACGCGCTG GTACGGGCCT ATGCCGTGGG CAGCTTTACC
CGTTTGCCGG CTGAACAGCG TATTGCGCCG TTGCTGCCGC TGTTGCAGGA CCCCGCCCTG
GCGGTACGCG ATGAAGCCGT GCGGGCCTTG GCCGATGTAC CCGCCGCACA GCTTCCCGAA
GCCAGCCGCG CAGCGTTCAC CACTTCGCTT GCCGACTACG AGCAGCGCTT GCGGGGTAAT
GCCGACCTGC CTGGTGGGCG GCTCAACCTG GCGGTGCTGA TGCAGCGCCA GGGCCATGAC
GCGCAGGCCA TGGAGCAGTA CCGCCAGGCG TTGCACATGG ACCCGTATTT CACACCGGCC
AGGGTCAACC TGGTGACCCT GGCCAGCAGC AGCCAACGTC TGGATGACGC CGAAACACTG
CTGCGCGAAG GCGTTGCGCT GGACAAGATG CCGGCAACGG ACCGTGGCAA CCTGGCGTAC
ATGCTGGCCC TGTTACTGGT CGAGCGGAGC AAGCCGCAAG AAGCGGTCGA CTGGATGGAG
CAGGCAGCTG TGGCGCTGCC GGGCAATTCG CGTATTCGCT ACAACCAGGG CCTGTTGCTG
TCCCGCATGA ACCGCCGCGA CGAAGCGCTG CAGGCCTTGC GCAGCGGCCT GCAGCAAGCG
CCTGAAGATG CCGACTTGCT GTATACGCTG ATCTACCTGC ATGCCTTGGC CGGTGAGCGT
GAACAGGCCT ACCCGTATGT GCGGCGAATG CGCGAGGCCG CGCCCGACGA TCCACGGTTG
CAGGCGATCG AACCTTACTG GCGCAACAAC CCGTGA
 
Protein sequence
MGWRAQVMQG GWVALCLGVL LLISSGVSLG AAAVGEGQLP ALAKDREGYA DADSCQGCHA 
QQAGQWQHSD HAWALRDASA ANVLGDFNDV HYDQDGVKAH FYRKGGGYFV NIEGEDGRPA
DFQVLHTFGY APLQQYLVAL SRGRLQALTI AWDSRPAEQG GQRWFSLYPG QRFAPGDPLH
WTGRYQNWNG MCADCHSTRL VKHYDDAKDS FASTWQEKTV GCQACHGPSQ AHVDWAREHP
GASPAQGLSV DVKALGSRGQ VEQCAYCHSR RQSLGTGQMP GHPHLDQSLP ATLRTGLYHD
DGQIDGEVYE YGSFTQSKMF AAGVGCTDCH DPHTTQVRIE GNGLCLQCHN AQPNTARFAG
LQAKDYDSPA HHHHAAGSPG AQCVNCHMPS KDYMVIDPRR DHSLRIPRPD LAAQGIGPDA
CTTCHQGREP AWAASAIDSW FTAPKRAAHY GQAFHGVRQD PGTSLSRLGY LLADKHNPAI
VRATAAQQLA DLGPAAASNL RWALQDSDAL VRAYAVGSFT RLPAEQRIAP LLPLLQDPAL
AVRDEAVRAL ADVPAAQLPE ASRAAFTTSL ADYEQRLRGN ADLPGGRLNL AVLMQRQGHD
AQAMEQYRQA LHMDPYFTPA RVNLVTLASS SQRLDDAETL LREGVALDKM PATDRGNLAY
MLALLLVERS KPQEAVDWME QAAVALPGNS RIRYNQGLLL SRMNRRDEAL QALRSGLQQA
PEDADLLYTL IYLHALAGER EQAYPYVRRM REAAPDDPRL QAIEPYWRNN P