| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3056 |
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| Symbol | |
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| ID | 5870841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3412002 |
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| End bp | 3412499 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641548172 |
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| Product | alpha-2 type XI collagen |
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| Protein accession | YP_001669284 |
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| Protein GI | 167034053 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.245138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTG CCGCCCCCTC CATCGACCAG TTGCGCGAGC TGACGCCGGG TGTGCCGCCG
TTCAGCTACC TGCCGCAGAC CTGGGCCTGG TGGGTGCTTG GCGTACTGGT GCTGTTGCTG
GCCTGCCTTT GTGTGGCGCT GCGCTGGCAC CGTTGGCGGC GCGACCGGTA CCGCCGTGAA
GCGCTGGCCC GGCTTGATGA GCTGGCAGCG AGTGAGGGTG AACAACGGCT TGTGGCGTTG
CGTGAACTGC CCGAATTGCT CAAGCGTGTG GCGCTGTCGA TGCCGGATGC GCCGCCCGTG
GCGAGCTTGG CCGGCGCGCA ATGGCAGTGC TTCCTCGACC AGCGCGCCCG CCGGCCGCTG
CCATCGGGCT TTGCCGACAC CCTGCAGTTG CTTGCCTACG CGCCGGACGC GACCTTGCGC
CGGCTGGACA CGCAGCAGGC GAACGCGTTG TTCGGTGCCA GCCGTGGCTG GATCGAGGGG
CACCATGTGG CGCTTTGA
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| Protein sequence | MNAAAPSIDQ LRELTPGVPP FSYLPQTWAW WVLGVLVLLL ACLCVALRWH RWRRDRYRRE
ALARLDELAA SEGEQRLVAL RELPELLKRV ALSMPDAPPV ASLAGAQWQC FLDQRARRPL
PSGFADTLQL LAYAPDATLR RLDTQQANAL FGASRGWIEG HHVAL
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