| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3048 |
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| Symbol | |
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| ID | 5870833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3400110 |
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| End bp | 3401138 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548164 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001669276 |
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| Protein GI | 167034045 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.428431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGCG ATTCCATGGA CAGCATTCGC GGCAGCGCAT TGCTGCAATA TGACCAGCTA
CTGGTCGAAC ACGGTGCTGC GCAGCGGGAC TTTCTGGCCC CGCTGCACAT TGCCCCGGAT
GTGGTCGGCA ACTACGGCAA GCACCTACCC TACCTGAGCC TGGTGCAACT GTTCGAAGGC
AGCGCGCACG CCCTGAGCCT GCCCCGCTTC GGCCTGGAGC TGGCGTTGCG CCAAGGCTCG
ACCCTGGTCG GCCCGCTGCG CCACCTGGCC AACTCCGCCC CCACCGTAGG CCACGCCCTG
GTGGCGGTAA TCCGTTACAT GCGCCACTAC AGCCCGGCTA TCCACTTTCG CCTGGAACAC
CGCGCCGGGC AGGCCATGCT GTTTTTCGAC AACGGCCTGC CGAGTTCCGA ACAGACGCCG
CAAATTGTCG AGAAATCAGT GATGGGGGCG CGGCTGCTGA TTGGCGAGCT GCGCGGCGCG
CCACTGCGGC CACGGGCGGT GACCTTGCGC CACGCCGCGC TGGGCGATGC CTCGGGCTAC
ACACGTTACT TTGACTGCCC GGTGCTGTTC GGCCAGGCCC ACAACAGCCT GGTGCTGGGG
GCTGACGTAC TGCAAGAAGC CTGCGTGCAC CATGACGCCG ACCTGCATGC CATCGTCCGC
CACTTCCTGG AGAACCAGGC CGTCCCTTGC GACAGCCTGC TGGCCTCGGT AGAGCGCAAG
ATCCAGATGC TGCTGCCCGC CCAACGCTGC ACCCTGGAAC AGGTGGCGCT GGCCTTGAAC
ATGAATTCAC GCACCTTGCA ACGGCACCTG GCCAGCGATG GTATCGAATT CGAAGGCTAT
CTGGACGGTA TTCGCCGCTG CCAGGCACAA CAGATGCTAC GCAAGACCAC CTTGTCTGTC
GGGCAGATCG CCAACGAGCT GGGCTATCGC CGTACCACCT CGTTCTGCCG TGCGCATTTG
CGCTGGTTCG ATATCACGCC GCTTGAGCAT CGACGGCAAT ACGGCGACCC GGTGATCGCC
GCACTTTGA
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| Protein sequence | MRRDSMDSIR GSALLQYDQL LVEHGAAQRD FLAPLHIAPD VVGNYGKHLP YLSLVQLFEG
SAHALSLPRF GLELALRQGS TLVGPLRHLA NSAPTVGHAL VAVIRYMRHY SPAIHFRLEH
RAGQAMLFFD NGLPSSEQTP QIVEKSVMGA RLLIGELRGA PLRPRAVTLR HAALGDASGY
TRYFDCPVLF GQAHNSLVLG ADVLQEACVH HDADLHAIVR HFLENQAVPC DSLLASVERK
IQMLLPAQRC TLEQVALALN MNSRTLQRHL ASDGIEFEGY LDGIRRCQAQ QMLRKTTLSV
GQIANELGYR RTTSFCRAHL RWFDITPLEH RRQYGDPVIA AL
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