Gene PputGB1_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3028 
Symbol 
ID5870813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3375258 
End bp3375665 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content55% 
IMG OID641548144 
Producthypothetical protein 
Protein accessionYP_001669256 
Protein GI167034025 
COG category[S] Function unknown 
COG ID[COG3602] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.398731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGCG AAAAATCCAT CTCAGCCCTG CTCCGCGGCA TGAGCCCAGT CCTCAATGAA 
GGCGACTTTG TATTCTGCAC AGTGGCGGAC GCGTCCGCGC TTCTGGGTAC CGATGTACTT
GGTACATTCC GCGAAAAAGA AGGCTTCACT GTCATCATTG AGCGCGAACG CGCTGATGCA
CTGGGCCTTG AGTACAATTT TGTGGCGGCT TGGATCACGC TCACGATCCA CTCAGCGCTT
GATGCGGTGG GTTTGACGGC CGCATTCGCG ACCGCACTCG GAAAGGCTGG CATCAGTTGC
AACGTGATCG CCGCGTTCTA CCATGATCAC ATTTTCGTGG CCAAGGATGA TGCCGCTAAA
GCCATCGATG TCCTCCAAGC TTTATCTCGC GCAGGTGAAT CCAGATAG
 
Protein sequence
MSGEKSISAL LRGMSPVLNE GDFVFCTVAD ASALLGTDVL GTFREKEGFT VIIERERADA 
LGLEYNFVAA WITLTIHSAL DAVGLTAAFA TALGKAGISC NVIAAFYHDH IFVAKDDAAK
AIDVLQALSR AGESR