Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3005 |
Symbol | |
ID | 5870790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3349946 |
End bp | 3350389 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641548121 |
Product | hypothetical protein |
Protein accession | YP_001669233 |
Protein GI | 167034002 |
COG category | [S] Function unknown |
COG ID | [COG2323] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.166871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCGA TCCTCCGCGC AGCCGGAATG TATATCGCCC TCATGCTGCT GTTTCGCGTG GCCGGACGGC GCTCGCTGGC CGATTTGACA ACCTTCGACT TCGTGTTGTT GCTGATCATC GGGGAAGCCA CCCAGCAGGC GCTTCTGGGT GACGATTTTT CATTCACCAA TGCCATGCTG GTAATCGCCA CTCTGATCGT ACTGGACGTC GGGCTTTCAC TCGCGAAGCT GAACTCCAAG CCCTTGGCCC GACTTCTGGA CGGGCACGCT ACCCTGGTTG TCGAGAATGG GCGCTTTCTG CATCACCGCA TGCGTCGGGC ACGACTCACG GAGGACGATA TCCTCGAGTC AGCACGAGAC AGCCAAGGCA TCGAAAAAAT TGAGCAAGTG AAGTTCGCTG TCGTCGAACG CAATGGAAAG ATTTCAATCA TTCCTACCGA GTAA
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Protein sequence | MDSILRAAGM YIALMLLFRV AGRRSLADLT TFDFVLLLII GEATQQALLG DDFSFTNAML VIATLIVLDV GLSLAKLNSK PLARLLDGHA TLVVENGRFL HHRMRRARLT EDDILESARD SQGIEKIEQV KFAVVERNGK ISIIPTE
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