Gene PputGB1_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3005 
Symbol 
ID5870790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3349946 
End bp3350389 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content56% 
IMG OID641548121 
Producthypothetical protein 
Protein accessionYP_001669233 
Protein GI167034002 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.166871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCGA TCCTCCGCGC AGCCGGAATG TATATCGCCC TCATGCTGCT GTTTCGCGTG 
GCCGGACGGC GCTCGCTGGC CGATTTGACA ACCTTCGACT TCGTGTTGTT GCTGATCATC
GGGGAAGCCA CCCAGCAGGC GCTTCTGGGT GACGATTTTT CATTCACCAA TGCCATGCTG
GTAATCGCCA CTCTGATCGT ACTGGACGTC GGGCTTTCAC TCGCGAAGCT GAACTCCAAG
CCCTTGGCCC GACTTCTGGA CGGGCACGCT ACCCTGGTTG TCGAGAATGG GCGCTTTCTG
CATCACCGCA TGCGTCGGGC ACGACTCACG GAGGACGATA TCCTCGAGTC AGCACGAGAC
AGCCAAGGCA TCGAAAAAAT TGAGCAAGTG AAGTTCGCTG TCGTCGAACG CAATGGAAAG
ATTTCAATCA TTCCTACCGA GTAA
 
Protein sequence
MDSILRAAGM YIALMLLFRV AGRRSLADLT TFDFVLLLII GEATQQALLG DDFSFTNAML 
VIATLIVLDV GLSLAKLNSK PLARLLDGHA TLVVENGRFL HHRMRRARLT EDDILESARD
SQGIEKIEQV KFAVVERNGK ISIIPTE