Gene PputGB1_2992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2992 
Symbol 
ID5870777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3341579 
End bp3342388 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content53% 
IMG OID641548108 
Productalpha/beta hydrolase fold 
Protein accessionYP_001669220 
Protein GI167033989 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.772268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.459259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCTTC AGCGACGGAA TAATGTGAAA GTGTTGGGAC GCGGCTACGC AACCCTGATC 
TTTCTACACG GTTTTGGCTG TGATCAATCG ATGTGGAGCT ACCTCCTCCC GCATTTCTCG
AAGCGCTTTC GCATAGTCGT TCTCGATCAC GTGGGTGCAG GACGGTCAGA TCTGAGCGCC
TACTGTGTTG AGAAGTACAG CACGTTGAAC GGGTACGCAC AGGACTTGAA TGAGATCATT
GACGCATTCG CCAAAGGCCC GGTTATTCTG ATAGGTCATT CAGTGAGCGC TATGATCGCA
GCGTTGGCCG ATGGAGCGTG CCCAGGCCGC ATAGCTGCAC ATGTCATGGT AGGGCCTTCA
CCCTGCTACA TCGACTCCGA GGGGTACATC GGTGGTTTCA AAGAAGCCGA CATACAGTCA
CTGCTTGATA CTCTGGACAG CAACTATCTC GGCTGGTCGA GCACCATGGC CCCGGTAATC
ATGGGCACGC CAGGACAACC GGAATTGAGC AAAGAGCTGA CCAACTCTTT CTGTCGAACA
GATCCCGAAA TCGCAAAGCA ATTTGCCCGC GTAACCTTCC TTTCAGACAA TCGAAAAGAC
GTGTCGGGAC TGCGAACCCC AACCTTGATC CTGCAATCCA CCGAAGACCT TATTGCCCCT
ACCGCAGTAG GCGAGTATCT GAATAGCGTT CTACTCAATA GCGAGCTCTG CCTGGTACCC
AACATAGGAC ACTGTCCACA TATGAGCGCG CCCCACGCTT GCATAGAAGC AATGGACGCT
TTTCTATCCC CCTGGATTTC GGCTCCATGA
 
Protein sequence
MNLQRRNNVK VLGRGYATLI FLHGFGCDQS MWSYLLPHFS KRFRIVVLDH VGAGRSDLSA 
YCVEKYSTLN GYAQDLNEII DAFAKGPVIL IGHSVSAMIA ALADGACPGR IAAHVMVGPS
PCYIDSEGYI GGFKEADIQS LLDTLDSNYL GWSSTMAPVI MGTPGQPELS KELTNSFCRT
DPEIAKQFAR VTFLSDNRKD VSGLRTPTLI LQSTEDLIAP TAVGEYLNSV LLNSELCLVP
NIGHCPHMSA PHACIEAMDA FLSPWISAP