Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2978 |
Symbol | |
ID | 5870763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3328356 |
End bp | 3329741 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641548094 |
Product | methyltransferase small |
Protein accession | YP_001669206 |
Protein GI | 167033975 |
COG category | [S] Function unknown |
COG ID | [COG2170] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00536] HemK family putative methylases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.514386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.292811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGGCG TGTTTAGACC CTACGAAAAA CAGCTCTTAC ATGATTGGAT TGCCGCCGGC TGGCAGAAGT CACGCCGTTT GAAGGCGCCA GAGCAGACCT ATTTTGAGCA CGTCGAGGAT GAACACTACC CTGAATTTTC TCTGGAGAAC GTGCTTGCCA AGATGGCAGG AGCTCGTCAT GCCTTGCCAG AAGGCTTGCG CGATGTCCTC GGCTGGAACA GGCCATTTAC TCCCACCACA TTGCTACCTG ATGATTTGGC AAAGCTGATG CAAGCGAATG TCATCGAATA CGAAGGCAAT CAGCTACGAA GCACCGTGCG CTTCTCAACC TTGGGTGATT GGACGTTTCT GCATTCGGGC TATCCCACGG TGGCAGCCGA CGCGGTATTT TTCGGGCCGG ACAGCTATCG ATTCGCTCAC GCCCTACAGG CGCATCTGCA GCGGGATACA GGCGAGATCC GGCACGCCGT AGAGATAGGC TCAGGCACTG GAATTGGTGC CATCGTCATT GCTACTGCAA GGCGCAGTGC ACGAGTAATG GCGGTGGACA TCAACGATCT GGCCTTGCGC TACACCGCCA TCAACGTCGC TCTGGCGGGT CATGCTAATG TCTCTGTGAA ACACAGCGAT GTGCTACAGG ACGTCACCGG GACATTCGAT CTGATTGTCG CCAACCCACC CTACATGCTT GATGCCAGCG AGCGCACGTA TCGCCATGGT GGCGGGGTAT CAGGGGAAGG GTTGTCATTG AGGATTATCG AGGAATCGTT GCCACGCCTT GCAGCTGGAG GATTTCTACT TCTCTACACA GGTGTTGCAG TAGCGGCGGG CGAGGACAGG TTCTATAACG CGGATTGGCC TGACTATGAG CGATACCTGG ACTTACTGCT CCGCACAGGG GTACGGCCCG ATGTCGACTG CTGGTGGGCG ATCCGGCCAT CACGGCGCTA CCCTACCGTT GAACTGCGAA TCGCCGATGG TTGCCCGCGA CTAGAAGACG GGCTGTGCAT AGCTGCCTTA TTTTATGAAA TGGTTACGCA TTGCATCGAG GTAGGCAGGG AGATAAACCT GCTCACCCGC GAGACGCACT GGGTCACTCA AGAAAACCTT TGGCGCGCTA TGCGTTATGG TCGTGATGGG CGCTTCATCG ACTTGTCTTC GCTAGCGCCA CTATCGGCCC GTGAATGGTT ATTTCAGTTG CAGGCCAGGT TCGAACTAGC AGATGTGCAC ATAGACCAGG CCGTACGCAT TCTCACAACG GGTAGCAGTG CTGACCAACA GCTCAAGGTC TATGACCAGG CAGTGACGCG TGGCCTTGCC CATGAACTTG CCTTACAGGA TGTCGTCGAT CTGCTCGTCA ACCAGACGGC ACAGCCAGCC CTCTGA
|
Protein sequence | MFGVFRPYEK QLLHDWIAAG WQKSRRLKAP EQTYFEHVED EHYPEFSLEN VLAKMAGARH ALPEGLRDVL GWNRPFTPTT LLPDDLAKLM QANVIEYEGN QLRSTVRFST LGDWTFLHSG YPTVAADAVF FGPDSYRFAH ALQAHLQRDT GEIRHAVEIG SGTGIGAIVI ATARRSARVM AVDINDLALR YTAINVALAG HANVSVKHSD VLQDVTGTFD LIVANPPYML DASERTYRHG GGVSGEGLSL RIIEESLPRL AAGGFLLLYT GVAVAAGEDR FYNADWPDYE RYLDLLLRTG VRPDVDCWWA IRPSRRYPTV ELRIADGCPR LEDGLCIAAL FYEMVTHCIE VGREINLLTR ETHWVTQENL WRAMRYGRDG RFIDLSSLAP LSAREWLFQL QARFELADVH IDQAVRILTT GSSADQQLKV YDQAVTRGLA HELALQDVVD LLVNQTAQPA L
|
| |