Gene PputGB1_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2978 
Symbol 
ID5870763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3328356 
End bp3329741 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content56% 
IMG OID641548094 
Productmethyltransferase small 
Protein accessionYP_001669206 
Protein GI167033975 
COG category[S] Function unknown 
COG ID[COG2170] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00536] HemK family putative methylases 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.514386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.292811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGCG TGTTTAGACC CTACGAAAAA CAGCTCTTAC ATGATTGGAT TGCCGCCGGC 
TGGCAGAAGT CACGCCGTTT GAAGGCGCCA GAGCAGACCT ATTTTGAGCA CGTCGAGGAT
GAACACTACC CTGAATTTTC TCTGGAGAAC GTGCTTGCCA AGATGGCAGG AGCTCGTCAT
GCCTTGCCAG AAGGCTTGCG CGATGTCCTC GGCTGGAACA GGCCATTTAC TCCCACCACA
TTGCTACCTG ATGATTTGGC AAAGCTGATG CAAGCGAATG TCATCGAATA CGAAGGCAAT
CAGCTACGAA GCACCGTGCG CTTCTCAACC TTGGGTGATT GGACGTTTCT GCATTCGGGC
TATCCCACGG TGGCAGCCGA CGCGGTATTT TTCGGGCCGG ACAGCTATCG ATTCGCTCAC
GCCCTACAGG CGCATCTGCA GCGGGATACA GGCGAGATCC GGCACGCCGT AGAGATAGGC
TCAGGCACTG GAATTGGTGC CATCGTCATT GCTACTGCAA GGCGCAGTGC ACGAGTAATG
GCGGTGGACA TCAACGATCT GGCCTTGCGC TACACCGCCA TCAACGTCGC TCTGGCGGGT
CATGCTAATG TCTCTGTGAA ACACAGCGAT GTGCTACAGG ACGTCACCGG GACATTCGAT
CTGATTGTCG CCAACCCACC CTACATGCTT GATGCCAGCG AGCGCACGTA TCGCCATGGT
GGCGGGGTAT CAGGGGAAGG GTTGTCATTG AGGATTATCG AGGAATCGTT GCCACGCCTT
GCAGCTGGAG GATTTCTACT TCTCTACACA GGTGTTGCAG TAGCGGCGGG CGAGGACAGG
TTCTATAACG CGGATTGGCC TGACTATGAG CGATACCTGG ACTTACTGCT CCGCACAGGG
GTACGGCCCG ATGTCGACTG CTGGTGGGCG ATCCGGCCAT CACGGCGCTA CCCTACCGTT
GAACTGCGAA TCGCCGATGG TTGCCCGCGA CTAGAAGACG GGCTGTGCAT AGCTGCCTTA
TTTTATGAAA TGGTTACGCA TTGCATCGAG GTAGGCAGGG AGATAAACCT GCTCACCCGC
GAGACGCACT GGGTCACTCA AGAAAACCTT TGGCGCGCTA TGCGTTATGG TCGTGATGGG
CGCTTCATCG ACTTGTCTTC GCTAGCGCCA CTATCGGCCC GTGAATGGTT ATTTCAGTTG
CAGGCCAGGT TCGAACTAGC AGATGTGCAC ATAGACCAGG CCGTACGCAT TCTCACAACG
GGTAGCAGTG CTGACCAACA GCTCAAGGTC TATGACCAGG CAGTGACGCG TGGCCTTGCC
CATGAACTTG CCTTACAGGA TGTCGTCGAT CTGCTCGTCA ACCAGACGGC ACAGCCAGCC
CTCTGA
 
Protein sequence
MFGVFRPYEK QLLHDWIAAG WQKSRRLKAP EQTYFEHVED EHYPEFSLEN VLAKMAGARH 
ALPEGLRDVL GWNRPFTPTT LLPDDLAKLM QANVIEYEGN QLRSTVRFST LGDWTFLHSG
YPTVAADAVF FGPDSYRFAH ALQAHLQRDT GEIRHAVEIG SGTGIGAIVI ATARRSARVM
AVDINDLALR YTAINVALAG HANVSVKHSD VLQDVTGTFD LIVANPPYML DASERTYRHG
GGVSGEGLSL RIIEESLPRL AAGGFLLLYT GVAVAAGEDR FYNADWPDYE RYLDLLLRTG
VRPDVDCWWA IRPSRRYPTV ELRIADGCPR LEDGLCIAAL FYEMVTHCIE VGREINLLTR
ETHWVTQENL WRAMRYGRDG RFIDLSSLAP LSAREWLFQL QARFELADVH IDQAVRILTT
GSSADQQLKV YDQAVTRGLA HELALQDVVD LLVNQTAQPA L