| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2976 |
|---|
| Symbol | |
|---|
| ID | 5870761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3327195 |
|---|
| End bp | 3327515 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641548092 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001669204 |
|---|
| Protein GI | 167033973 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.505456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.467098 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGCA AGAAAGGCGG CAAATGGAAT TTCCCTGGTG GTTCGATTGA AGCAGGCGAA
ACGCCTTTTG CAGCGGCTGC TCGAGAACTA GAGGAAGAGA CGAGCATTAC CGGTCATGAC
TTGCTTCACC TGTGCACCAT CACCGTGGAA TCGACCATTC ATCACATTTA CACCACTCAC
TTTCACGCCG GGGATAGAGC CGTAGCCTGC AATGAGATTG CGGCGTGCAA ATGGGTGCTG
CGCGCCAAGC TGAAACCTTC CTTGCTTAAT GCCAGGGCTG CGGGCCTTAT AGCGACCCAC
CTGCCGGCCC TGAGCGTTTA G
|
|---|
| Protein sequence | MVRKKGGKWN FPGGSIEAGE TPFAAAAREL EEETSITGHD LLHLCTITVE STIHHIYTTH
FHAGDRAVAC NEIAACKWVL RAKLKPSLLN ARAAGLIATH LPALSV
|
|---|
| |