| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2944 |
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| Symbol | |
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| ID | 5870729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3293465 |
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| End bp | 3295114 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548060 |
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| Product | VRR-NUC domain-containing protein |
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| Protein accession | YP_001669172 |
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| Protein GI | 167033941 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCCC ATTCCGTCGA CGACCCGTTC TACTACCTGT ACAACTTCCG CCAGGTTGTG
CTGTGGGTCG AACAGCGCTA CCAGGACCTG CTCGATGACC AGGAACTGGC TTTCATCCGC
GCATTCAGCC AACTGCAAGC ACCAGCCCAA GCCTTGATGG TGCGTATGGT CATGCGCAAA
GGCGAGTTGT TTCGCAGCGA CCGGCTCGAC TACGCCGAAA TCGGCGACAC TGCGCTGGCG
CTGCAGCCAT TGCAGGCCCT GGGCTGGGTG CGGGAACCCG AGCAACTGGA ACTGGAGCAG
CTGTTCGCCT TGCTACGCAA GGACGAACTG GCCCGTTGTT TCGCCCGACA ACTGAGCCGC
CCGCGTGCCG CCAAGCATGA GCTGTTGGCA CAGCTGAAGC CACTGGAGCT ACGGGCCCGG
CCTTTGGCCG AATGGTTTCC CGACAGCGAG GTGCGCATCC TTCAGTGGTG CTTGCAGCCT
CTGTGCGACC GGGTGCGTTT GTTGTTCTTC GGCAACCTGT ACCAGGACTG GTCAGACTTC
GTCCTCGCCG ACCTTGGCCT GCTGCGCTAC GAGCAGGTGC CGTTCAGCAG CGATTCCCGA
GCCTTGCAAC GGCGTGACGA GCTCGACCTG GCCATGGCGT TGCACCAGTG CGCCGAGCGC
CTGGAGCAGG GTGGCGACCC AGTGTCGATC CTCGCGACCC TGCAAGGGCT GCACAGTGAA
AACCCTTGGC TGGCCCGGCG CCATGCGCGG CTGCAATTCG CCTTGGGCCA ACAATGCGAG
CGCCAGGGTG ACTGGGATCT GGCCATGGCC GTGTACGCGC AGTGCGACCA TGCCCAGGCA
CGCATTCGCC AGGTGCGGGT ACTGGAGCGC AGCGAACAGT GGCCCCAGGC CCATGCACTG
GCGCTACAGC TGGCTGCGGC ACCGGCCAAT GCGCTGGAAG TGCAGGCCCT GGAACGCATG
CTGCCACGCC TGGCGCGCAA GCTTGGCGGC CCGCCACAGC GGCGCCAGCG TGTCGCGCCG
CTGGAGCTGA TCGAACTTGA ACTGCCCCGC GAGCACGCGG CACTGGGCGT GGAAGAAGCC
GTGCGTCAGC ACCTGGCGCT AGAGGGGGGG CAGGCACATT ATGTGGAGAA CACGTTGTTC
AACAGCCTGT TTGGCCTGTT GTGCTGGGAG GCCATCTTCG CCCCGGTGCC CGGCGCATTC
TTCAACCCGT TCCAGGCTGC GCCACAGGAC CTGCACGACA GCGACTTCCA GCAACGGCGC
AGTGCACTGT TCCAGCGCTG CCTCGGGCGG CTCGATGACG GCAGCCATCA CCAGGCGATT
CTCGACTGCT ACAAGGGCAA GCAGGGCCTG CAGTCGCCGT TCGTGTTCTG GTCCATGCTC
AGCGAAGACC TGCTGCAACA GGCTTTGGCT TGCCTGCCGG CCGCCCAACT GAAGCAGTGC
TTTCTGCGCC TGCTGCAGGA CATTCGCAGC AACCGTGCCG GCATGCCGGA CCTGATCCAG
TTCTGGCCCG AGCAGGGCCT TTATCGCATG GTCGAGGTCA AGGGGCCCGG TGACCGTCTG
CAGGACAACC AACTGCGCTG GCTGGAGTTC TGCAGGCAAC ACGGCCTGCC CGTCGCGGTG
TGCCATGTGC GCTGGAGCGA AACGCCTTGA
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| Protein sequence | MIAHSVDDPF YYLYNFRQVV LWVEQRYQDL LDDQELAFIR AFSQLQAPAQ ALMVRMVMRK
GELFRSDRLD YAEIGDTALA LQPLQALGWV REPEQLELEQ LFALLRKDEL ARCFARQLSR
PRAAKHELLA QLKPLELRAR PLAEWFPDSE VRILQWCLQP LCDRVRLLFF GNLYQDWSDF
VLADLGLLRY EQVPFSSDSR ALQRRDELDL AMALHQCAER LEQGGDPVSI LATLQGLHSE
NPWLARRHAR LQFALGQQCE RQGDWDLAMA VYAQCDHAQA RIRQVRVLER SEQWPQAHAL
ALQLAAAPAN ALEVQALERM LPRLARKLGG PPQRRQRVAP LELIELELPR EHAALGVEEA
VRQHLALEGG QAHYVENTLF NSLFGLLCWE AIFAPVPGAF FNPFQAAPQD LHDSDFQQRR
SALFQRCLGR LDDGSHHQAI LDCYKGKQGL QSPFVFWSML SEDLLQQALA CLPAAQLKQC
FLRLLQDIRS NRAGMPDLIQ FWPEQGLYRM VEVKGPGDRL QDNQLRWLEF CRQHGLPVAV
CHVRWSETP
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