| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2845 |
|---|
| Symbol | |
|---|
| ID | 5870631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3188855 |
|---|
| End bp | 3189901 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641547963 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001669075 |
|---|
| Protein GI | 167033844 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.292154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGG CAAGGCTTCA CGATTTCATG GGCAAGCTGG TGAACGACAT GGGCGCAGCG
GCGACACTGG CCAATGTCAT CCTCGGCGAT GAGCTGGGGC TGTACCGGGC CATGGCCGAC
AGCCAGGCGG TTACCCCCGA GCAACTGGCG GAAAAGACCG GCTGTCATCC GCGGTTGGTG
CGCGAATGGT TGAATGCACA GGCGGCATCG GGCTATGTGG TGCATGACAA GGGCCGCTTC
GTACTGCCTG AAGAGCAGGC CATGGCCCTG GCGCTGGAGG ATTCCCCGGC TTACATGGCC
GGCGGTGCAG CCGTGGTGGC GGCGCTGTTC CATGACAAGG ACAAGCTGGT AGCCGCCATG
CGCGGCGATG GCGGTCTGGC CTGGGGCGAC CACCATCCGT GCATGTTCAG CGGCACCGAG
CGGTTCTTCC GGCCAGGGTA CCGCACCTTT CTGGTGGCCA ATTGGCTGCC GGCGCTGGAG
GGTGTGGTGG CCAAGCTGCA AGCGGGCGCC AAGGTGGCAG ACGTGGGGTG CGGCCATGGT
GCCTCGACGC TGGTCATGGC GCAGGCGTTT CCGGCGTCGA CCTTCGTGGG GTACGACTAT
CACGGGCCTT CGATCGTCAC CGCCAACCAG CGTGCACGTG AGGCGGGCTT GGTGGAGCGG
GTGAGTTTCC AGCAGGCCAG CGCCAAGGAC TACCCAGGGC ATGACCACGA CCTGGTTTGC
TTCTTCGACT GCCTGCACGA CATGGGTGAC CCGGTGGGGG CAGCCAAGCA TGCCTATCGT
GCTTTGAAAC CTGACGGCAC GGTGATGTTG GTAGAGCCTT ATGCCGAGGA CTCGCTGGAC
GGCAACCTGA CGCCGGTCGG GCGGTTGTTC TATGCGGCGT CGACGTTCAT CTGCACGCCA
AACTCGTTGT CGCAGGAAGT GGGGCTGGGG TTGGGCGCGC AGGCCGGCGA GGCGCGTTTG
CGGGCAGTGT TCGAGGAGGC GGGGTTCAGC CGGTTCCGGC GGGCGACGCA GACGCCGTTC
AACCTGATTC TGGAGGCCCG CAAGTAG
|
|---|
| Protein sequence | MDEARLHDFM GKLVNDMGAA ATLANVILGD ELGLYRAMAD SQAVTPEQLA EKTGCHPRLV
REWLNAQAAS GYVVHDKGRF VLPEEQAMAL ALEDSPAYMA GGAAVVAALF HDKDKLVAAM
RGDGGLAWGD HHPCMFSGTE RFFRPGYRTF LVANWLPALE GVVAKLQAGA KVADVGCGHG
ASTLVMAQAF PASTFVGYDY HGPSIVTANQ RAREAGLVER VSFQQASAKD YPGHDHDLVC
FFDCLHDMGD PVGAAKHAYR ALKPDGTVML VEPYAEDSLD GNLTPVGRLF YAASTFICTP
NSLSQEVGLG LGAQAGEARL RAVFEEAGFS RFRRATQTPF NLILEARK
|
|---|
| |