| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2843 |
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| Symbol | |
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| ID | 5870629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3186422 |
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| End bp | 3187519 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641547961 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_001669073 |
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| Protein GI | 167033842 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.239369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA CGCCGTATTA CCTCATCGAT AAAACCAAGC TGCTCAGCAA CATGGAGAAG
ATCGCCTACG TGCGTGAACA CTCCGGTGCC AAGGCGCTGC TTGCCCTGAA GTGCTTCGCC
ACCTGGTCGG TGTTCGACCT GATGCAGCAG TACATGGACG GCACCACCTC GTCCTCCCTC
TTCGAGCTCA AGCTCGGCCG CCAGAAGTTC GCCGGCGAAA CCCACGCCTA CAGCGTGGCC
TGGGCCGACG ACGAGGTCGA GGAGATGCTC GAGAACTGCG ACAAGATCAT CTTCAACTCG
ATCGGCCAGC TGCAGCGTTT TGCCGAACAG TCCGAAGGTA AAGTGCGTGG TCTGCGCGTC
AACCCGCAGG TCAGCAGCTC CGACTACCTG CTGGCCGACC CGGCCCGCCC GTTCAGCCGC
CTGGGCGAAT GGGACCCGGC CAAGATCGAA CAGGTGATCG AACAGATCTC CGGCTTCATG
TTCCACAACA ACTGCGAGAA CGGTGACTTC GGCCTGTTCG ACAAGATGCT CACGCACATC
GAAGAGCGTT TCGGCCACCT GCTGCACAAG GTCGAGTGGG TCAGCCTCGG TGGCGGCATT
CACTTCACCG GTGAAGATTA TGCGGTAGAC GCCTTCTGCG CGCGCCTCAA GGCCTTCTCG
CAAACCTACG GTGTGCAGGT GTACCTGGAA CCCGGCGAAG CCGCCATCAC CAACAGCGCC
TCGCTGGAAG TGACCGTGCT CGACACCCTG TACAACGGCA AGCACCTGGC CGTGGTCGAC
AGTTCGATCG AAGCGCACCT GCTCGACCTG CTGATTTACC GCCTCAACGC CAAGATGGCC
CCCAACGACG GCGAGCACAC CTATATGGTC TGCGGCAAGT CGTGCCTGGC CGGTGACATC
TTCGGCGAGT ACCAATTCGA TCGTCCGTTG ACCATTGGCG ATCGCCTGTC GTTCATCGAC
ACGGCGGGGT ACACCATGGT CAAGAAAAAC TGGTTCAACG GTCTGAAAAT GCCTTCCATC
GTGGTCAAGC AACTCGACGG CAGCGTCGAA GTCGTCCGCG AGTTCGGTTT TGAAGACTAC
GTTTCCAGCC TGTCGTAA
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| Protein sequence | MIKTPYYLID KTKLLSNMEK IAYVREHSGA KALLALKCFA TWSVFDLMQQ YMDGTTSSSL
FELKLGRQKF AGETHAYSVA WADDEVEEML ENCDKIIFNS IGQLQRFAEQ SEGKVRGLRV
NPQVSSSDYL LADPARPFSR LGEWDPAKIE QVIEQISGFM FHNNCENGDF GLFDKMLTHI
EERFGHLLHK VEWVSLGGGI HFTGEDYAVD AFCARLKAFS QTYGVQVYLE PGEAAITNSA
SLEVTVLDTL YNGKHLAVVD SSIEAHLLDL LIYRLNAKMA PNDGEHTYMV CGKSCLAGDI
FGEYQFDRPL TIGDRLSFID TAGYTMVKKN WFNGLKMPSI VVKQLDGSVE VVREFGFEDY
VSSLS
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