Gene PputGB1_2834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2834 
Symbol 
ID5870620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand+ 
Start bp3176636 
End bp3177325 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID641547952 
Producthypothetical protein 
Protein accessionYP_001669064 
Protein GI167033833 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.263955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.106264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAA GGCTGAGCCA GTACCGCGGG ATCCATGACT TCGTTGAGAC CCTGAGCATG 
CCAGAGGCCT GGCGCAACAA TGTCGGCGAC CAGGCGCTCG GACGGTACAA CGTCGCGCCG 
ACCATGCCGG TGGCAGTGCT GCGGGAGGAT GATGCAGGCC CGCGCGCTGA CTTGGTGAGG 
TGGGGATGGC GGCCGCACTG GGCGACTGAC CGTGCTGCGC CGATCAATGC TCGGGTCGAA 
AAGGTGGCGC ACGGCGCGTT CTTCCGTGCG ATCTGGCCAC ACCGGGCAAT CACGCCAGTG 
GACGGATGGT TTGAGTGGAA AGATGAAGGC GGCCCGAAGA AGCAGCCGTA CTTCATCCAT 
CGGCGTGACG GGCGCCCTGC CCTTTGCGCG TCCATCGGCC AGTTTGCTGG CAACGAGCAC 
GACGGCTTCG TGATCATTAC CGCCGACGCC CAGGGAGGAA TGATTGACGT GCACGACCGC 
AGGCCTGTCG TGCTTTCGCC AGAACTGGCA TGCGAGTGGA TCGCAGCGGG CATGCCAAGC 
GAGCATGCAG AGCAACTGGT GCTCAACCTA AGCGAACCGG CCGAGGCCTT CGAGTGGTAT 
CGGGTGAGCA CTGCCGTCGG CAATGTGCGT AATCAGGGCG CCGGACTGAT CCTCCCGATT 
GATCGGCCCC TATCAATGCC GAATACGTAA
 
Protein sequence
MCGRLSQYRG IHDFVETLSM PEAWRNNVGD QALGRYNVAP TMPVAVLRED DAGPRADLVR 
WGWRPHWATD RAAPINARVE KVAHGAFFRA IWPHRAITPV DGWFEWKDEG GPKKQPYFIH 
RRDGRPALCA SIGQFAGNEH DGFVIITADA QGGMIDVHDR RPVVLSPELA CEWIAAGMPS 
EHAEQLVLNL SEPAEAFEWY RVSTAVGNVR NQGAGLILPI DRPLSMPNT