Gene PputGB1_2830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2830 
Symbol 
ID5870616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3174377 
End bp3174907 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content57% 
IMG OID641547948 
Productacetyltransferase 
Protein accessionYP_001669060 
Protein GI167033829 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00579309 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0978513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGCT TGCTCCTATT CGTCGCAAAA CTCAAAAAAC ACCTGTCTCC GCGTCAGTTC 
ATGCGCCTGC TGGATACCCA TGACCTGGGT AAAAAACAGT TGAATCGCCT ATTGGCCAAA
ACCGGTGTCC GTACCCAAAG CCATGTAGTC ATTCGCCCGC CGTTCTACTT CGAGCGCGGC
AACCTTGAAT TGGGGCAGGG CGCTTTCATC AACAGCGGGT GCGTGCTCCT CGACGAAGCA
ACTATCCGCA TCGGCCGCAT GGCCATGCTT GGCCCGCAGG TGCGTTTGTG TACGACCAGC
CACGATATCA ACCCCCAGCG GCGCAAGGAC AATGACTACA TCGCCCCGAT TACCGTGGGC
GACAATGCCT GGATTGGCGC GGGTGCCGTG GTATTGCCTG GCATCAATAT TGGCCATAAC
AGCGTGATCG CGGCGAACAG CGTGGTAACC GAGGATGTTC CGCCCAATGC GCTGTATGCC
GGCTCACCGG CAAAGTTCAA GAAGTGGCTG GTGGAGCCGG AGCTGGCTTG A
 
Protein sequence
MSRLLLFVAK LKKHLSPRQF MRLLDTHDLG KKQLNRLLAK TGVRTQSHVV IRPPFYFERG 
NLELGQGAFI NSGCVLLDEA TIRIGRMAML GPQVRLCTTS HDINPQRRKD NDYIAPITVG
DNAWIGAGAV VLPGINIGHN SVIAANSVVT EDVPPNALYA GSPAKFKKWL VEPELA