Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2830 |
Symbol | |
ID | 5870616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3174377 |
End bp | 3174907 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641547948 |
Product | acetyltransferase |
Protein accession | YP_001669060 |
Protein GI | 167033829 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00579309 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0978513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGCT TGCTCCTATT CGTCGCAAAA CTCAAAAAAC ACCTGTCTCC GCGTCAGTTC ATGCGCCTGC TGGATACCCA TGACCTGGGT AAAAAACAGT TGAATCGCCT ATTGGCCAAA ACCGGTGTCC GTACCCAAAG CCATGTAGTC ATTCGCCCGC CGTTCTACTT CGAGCGCGGC AACCTTGAAT TGGGGCAGGG CGCTTTCATC AACAGCGGGT GCGTGCTCCT CGACGAAGCA ACTATCCGCA TCGGCCGCAT GGCCATGCTT GGCCCGCAGG TGCGTTTGTG TACGACCAGC CACGATATCA ACCCCCAGCG GCGCAAGGAC AATGACTACA TCGCCCCGAT TACCGTGGGC GACAATGCCT GGATTGGCGC GGGTGCCGTG GTATTGCCTG GCATCAATAT TGGCCATAAC AGCGTGATCG CGGCGAACAG CGTGGTAACC GAGGATGTTC CGCCCAATGC GCTGTATGCC GGCTCACCGG CAAAGTTCAA GAAGTGGCTG GTGGAGCCGG AGCTGGCTTG A
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Protein sequence | MSRLLLFVAK LKKHLSPRQF MRLLDTHDLG KKQLNRLLAK TGVRTQSHVV IRPPFYFERG NLELGQGAFI NSGCVLLDEA TIRIGRMAML GPQVRLCTTS HDINPQRRKD NDYIAPITVG DNAWIGAGAV VLPGINIGHN SVIAANSVVT EDVPPNALYA GSPAKFKKWL VEPELA
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