Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2794 |
Symbol | |
ID | 5870580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3140740 |
End bp | 3141219 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547912 |
Product | ecotin |
Protein accession | YP_001669024 |
Protein GI | 167033793 |
COG category | [R] General function prediction only |
COG ID | [COG4574] Serine protease inhibitor ecotin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0520293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.188072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCAA CCCCGATGAC CGCGATTCTG GCCCTGACCC TGGCTGCCGC CGCACCTGCG ATGGCTGCCA GCCTGAAGGA CGTCGCCCCC TACCCAGAAG CGGAAAAAGG CTTCACCCGG CAGGTCATCC ACCTGCCGGC CCAGGCCGAT GAATCGGCCT ATAAACTCGA AATCCTCGCT GGCAAAACGC TGAAGGTCGA CTGCAATCGC CAGCGCCTGG GCGGCAGCCT GGAAGAACGC ACCCTGGAAG GCTGGGGCTA CAACTACTAC CGCCTGGACA AAGTCAGCGG CCCGGCCAGT ACGCTGATGG CCTGCCCAGA TGGCAAAAAG ACCGAAGCCT TCGTACCGGT GGTCGGTGAC GGCTTCCTGC TGCGCTACAA CAGCAAGCTG CCGGTGGTGG TCTATGTGCC CAAGGATGTC GAAGTGCGCT ACCGCGTGTG GTCGGCGTCG CAGGATGTGC AAAAGGCCAA CGTAGAGTAA
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Protein sequence | MRPTPMTAIL ALTLAAAAPA MAASLKDVAP YPEAEKGFTR QVIHLPAQAD ESAYKLEILA GKTLKVDCNR QRLGGSLEER TLEGWGYNYY RLDKVSGPAS TLMACPDGKK TEAFVPVVGD GFLLRYNSKL PVVVYVPKDV EVRYRVWSAS QDVQKANVE
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