Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2750 |
Symbol | |
ID | 5870538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3083995 |
End bp | 3084768 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641547871 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001668983 |
Protein GI | 167033752 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.337487 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCA CGGCAGACAG CGGCGGCGTG CGTTCGGTGG AGCGGGCGCT GGCCATTGTC GACCTGCTGG GCGAACACCA GGCACTGGGC CTGGAAGAAC TGCATTACCT GACGGCGCTG CCCAAGGCCA CGGTGTCGCG CATGCTTGCC ACCCTGCAGG AGCAAGGCTG GGTGTACCGT GGCCTGAGCG ACAGGCGCTA CCGGCTGTGC GCGCGGCGGC TGTTCGGTGA CCGCCAGTTG CGCTTCAAGC GGCGCCTGGT GGAAAGCGCC GCGCCCATGC TGCTGGAGCT GAGTGAACGC ACTGGGCTGG TAGCGGACCT GTCGTGCTTC GACGGCCAGC GGCTGGAAGT GATGGAAAGC GCCATTCCCC AGGTGTTGCG CAAGCGTTAC CCGCACACCT GCCAGATCGT CGGGCACCAT GCCAGCCTGT TCCATTCGGC GATGGGGCGG GCCTGCCTGG GTGAGCTGGC GGAGGACGAA GTGCAGCGCC TGGCGGCCCA TGCGCGGCTG GGTGACGACA CGTTGCTGCG CGATATTGAA GAAGAAGCCC ACAAGGGCTT TGGTCAGCGG ACCGAGGGGC ACTGGGAGTA CCCGGTGCGC CTGCCGTTCC TGATCCGCGC CATTGCCTTG CCGGTGCATG CCGAAGGGCG CCTTGCCGGG AGCATTGCCT TGCACTGGCC GCTGGACCAG GCGCCGGTGG AGCGGGTATT GAATTTACAC TTGAGCAGCC TGGCGACCAC CGTCGGCGAG GTGCAGCGGG CCTTGGCTGT TTGA
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Protein sequence | MGITADSGGV RSVERALAIV DLLGEHQALG LEELHYLTAL PKATVSRMLA TLQEQGWVYR GLSDRRYRLC ARRLFGDRQL RFKRRLVESA APMLLELSER TGLVADLSCF DGQRLEVMES AIPQVLRKRY PHTCQIVGHH ASLFHSAMGR ACLGELAEDE VQRLAAHARL GDDTLLRDIE EEAHKGFGQR TEGHWEYPVR LPFLIRAIAL PVHAEGRLAG SIALHWPLDQ APVERVLNLH LSSLATTVGE VQRALAV
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